RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 HOXD10P28358 340 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 CTSCP53634 463 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 SCARB2Q14108 478 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 ELOAQ14241 798 aaKnown RBP18.09■□□□□ 0.49
CBX1-202ENST00000393408 IRF3Q14653 427 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 HENMT1Q5T8I9 393 aaKnown RBP18.09■□□□□ 0.49
CBX1-202ENST00000393408 STEAP3Q658P3 488 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 BRAT1Q6PJG6 821 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 SLCO4C1Q6ZQN7 724 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 RASGEF1AQ8N9B8 481 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 KBTBD8Q8NFY9 601 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 OR52N2Q8NGI0 321 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 OR2A12Q8NGT7 310 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 NFKBIDQ8NI38 313 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.09■□□□□ 0.491e-6■■□□□ 11.8
CBX1-202ENST00000393408 NEIL2Q969S2 332 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 SLC35A5Q9BS91 424 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 CCDC59Q9P031 241 aaKnown RBP18.09■□□□□ 0.49
CBX1-202ENST00000393408 GPC6Q9Y625 555 aaPredicted RBP18.09■□□□□ 0.49
CBX1-202ENST00000393408 SLC5A10A0PJK1 596 aa18.08■□□□□ 0.49
CBX1-202ENST00000393408 A8MVJ9 347 aa18.08■□□□□ 0.49
CBX1-202ENST00000393408 WASH3PC4AMC7 463 aa18.08■□□□□ 0.49
CBX1-202ENST00000393408 RBBP4Q09028 425 aa18.08■□□□□ 0.49
CBX1-202ENST00000393408 FCHO2Q0JRZ9 810 aa18.08■□□□□ 0.49
CBX1-202ENST00000393408 TPRG1LQ5T0D9 272 aa18.08■□□□□ 0.49
CBX1-202ENST00000393408 MED27Q6P2C8 311 aa18.08■□□□□ 0.49
CBX1-202ENST00000393408 OTOP2Q7RTS6 562 aa18.08■□□□□ 0.49
CBX1-202ENST00000393408 OR51E2Q9H255 320 aa18.08■□□□□ 0.49
CBX1-202ENST00000393408 QSOX1O00391 747 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 TEX28O15482 410 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 PQBP1O60828 265 aaKnown RBP18.08■□□□□ 0.48
CBX1-202ENST00000393408 C6orf47O95873 294 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 ZNF763Q0D2J5 394 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 ST3GAL4Q11206 333 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 C10orf62Q5T681 223 aaPredicted RBP18.08■□□□□ 0.48
CBX1-202ENST00000393408 CCDC80Q76M96 950 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 NLRP8Q86W28 1048 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 STX19Q8N4C7 294 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 UTP15Q8TED0 518 aaKnown RBP18.08■□□□□ 0.48
CBX1-202ENST00000393408 TCF25Q9BQ70 676 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 CCM2Q9BSQ5 444 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 RNF167Q9H6Y7 350 aa18.08■□□□□ 0.48
CBX1-202ENST00000393408 LOC100506127A0A0U1RQW1 187 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 ITGA2P17301 1181 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 RGS6P49758 472 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 EEF1A2Q05639 463 aaKnown RBP18.07■□□□□ 0.48
CBX1-202ENST00000393408 SELENBP1Q13228 472 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 EIF4HQ15056 248 aaKnown RBP18.07■□□□□ 0.48
CBX1-202ENST00000393408 SOWAHCQ53LP3 525 aaPredicted RBP18.07■□□□□ 0.48
CBX1-202ENST00000393408 ARMCX4Q5H9R4 360 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 PNCKQ6P2M8 343 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 TMEM25Q86YD3 366 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 OR9Q2Q8NGE9 314 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 BTN2A2Q8WVV5 523 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 HTRA1Q92743 480 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 SLC35B4Q969S0 331 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 ZSCAN5AQ9BUG6 496 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 TMEM38AQ9H6F2 299 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 C1GALT1Q9NS00 363 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 ITGB1BP2Q9UKP3 347 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 KCNE2Q9Y6J6 123 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 A0A1W2PRU2 124 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 HTR3EA5X5Y0 456 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 LIMS1P48059 325 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 ZNF45Q02386 682 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 PRKCDQ05655 676 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 TMPRSS11BQ86T26 416 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 CRELD1Q96HD1 420 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 NFKBIL1Q9UBC1 381 aaPredicted RBP18.07■□□□□ 0.48
CBX1-202ENST00000393408 ACSL6Q9UKU0 697 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 MAFFQ9ULX9 164 aa18.07■□□□□ 0.48
CBX1-202ENST00000393408 DOCK6Q96HP0 2047 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 J3KTA2 159 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 M0R129 80 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 ATG13O75143 517 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 FURINP09958 794 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 PABPC1P11940 636 aaKnown RBP18.06■□□□□ 0.48
CBX1-202ENST00000393408 XCR1P46094 333 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 PRLHRP49683 370 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 SEPHS1P49903 392 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 CRISP3P54108 245 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 PNLIPRP1P54315 467 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 PDE7AQ13946 482 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 MPEG1Q2M385 716 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 CYP27C1Q4G0S4 372 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 ARMCX6Q7L4S7 300 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 COMMD6Q7Z4G1 85 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 DDX53Q86TM3 631 aaKnown RBP18.06■□□□□ 0.48
CBX1-202ENST00000393408 POC5Q8NA72 575 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 FAM83FQ8NEG4 500 aaPredicted RBP18.06■□□□□ 0.48
CBX1-202ENST00000393408 CIDECQ96AQ7 238 aaPredicted RBP18.06■□□□□ 0.48
CBX1-202ENST00000393408 REPS1Q96D71 796 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 CENPOQ9BU64 300 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 SLC46A2Q9BY10 475 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 EHD1Q9H4M9 534 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 ACER3Q9NUN7 267 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 IMPAD1Q9NX62 359 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 MS4A12Q9NXJ0 267 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 SLC6A14Q9UN76 642 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 DUSP12Q9UNI6 340 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms