RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 C1orf52Q8N6N3 182 aaKnown RBP12.95□□□□□ -0.34
PTN-202ENST00000393083 PCYOX1LQ8NBM8 494 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 FAM13CQ8NE31 585 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 OR4K1Q8NGD4 311 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 LIN37Q96GY3 246 aaPredicted RBP12.95□□□□□ -0.34
PTN-202ENST00000393083 METTL2AQ96IZ6 378 aaKnown RBP12.95□□□□□ -0.34
PTN-202ENST00000393083 CLPTM1LQ96KA5 538 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 CCDC74BQ96LY2 380 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 SERPINI1Q99574 410 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 TMEM121BQ9BXQ6 578 aaPredicted RBP12.95□□□□□ -0.34
PTN-202ENST00000393083 PITHD1Q9GZP4 211 aaPredicted RBP12.95□□□□□ -0.34
PTN-202ENST00000393083 TWSG1Q9GZX9 223 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 NT5DC2Q9H857 520 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 NMRK1Q9NWW6 199 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 BAIAP2L1Q9UHR4 511 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 ADGRE2Q9UHX3 823 aa12.95□□□□□ -0.34
PTN-202ENST00000393083 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.95□□□□□ -0.34
PTN-202ENST00000393083 IGKV1-8A0A0C4DH67 115 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 ANKDD1BA6NHY2 528 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 CAPN5O15484 640 aaPredicted RBP12.94□□□□□ -0.34
PTN-202ENST00000393083 TGFB1P01137 390 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 SERPINB1P30740 379 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 GFERP55789 205 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 PPP1CAP62136 330 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 CYP4F2P78329 520 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 TRA2AQ13595 282 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTN-202ENST00000393083 COQ5Q5HYK3 327 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 HACD2Q6Y1H2 254 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 BNC2Q6ZN30 1099 aaPredicted RBP12.94□□□□□ -0.34
PTN-202ENST00000393083 ARHGAP22Q7Z5H3 698 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 RETREG3Q86VR2 466 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 GATA6Q92908 595 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 VPS33AQ96AX1 596 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 SLC22A18Q96BI1 424 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 TSSK3Q96PN8 268 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 RHBGQ9H310 441 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 SLC52A3Q9NQ40 469 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 HRASLS2Q9NWW9 162 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 PRPF19Q9UMS4 504 aaKnown RBP12.94□□□□□ -0.34
PTN-202ENST00000393083 A0A088AWK7 358 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 A0A1W2PP18 115 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 TRBC2A0A5B9 178 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 DYTNA2CJ06 578 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 OR6C74A6NCV1 312 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 ASPDHA6ND91 283 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 TRABD2BA6NFA1 517 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 CFLARO15519 480 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 OR1F1O43749 312 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 EEDO75530 441 aaKnown RBP12.94□□□□□ -0.34
PTN-202ENST00000393083 CIB2O75838 187 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 RASSF9O75901 435 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 TACR1P25103 407 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 TIA1P31483 386 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTN-202ENST00000393083 GRK3P35626 688 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 PPM1FP49593 454 aaPredicted RBP12.94□□□□□ -0.34
PTN-202ENST00000393083 RAP1GDS1P52306 607 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 CLNS1AP54105 237 aaKnown RBP12.94□□□□□ -0.34
PTN-202ENST00000393083 CLDN8P56748 225 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 KIR2DS3Q14952 304 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 C16orf72Q14CZ0 275 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 RTP5Q14D33 572 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 PHF19Q5T6S3 580 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 KIAA1614Q5VZ46 1190 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 CYB5D1Q6P9G0 228 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 KLHL35Q6PF15 583 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 PLD3Q8IV08 490 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 WDFY3Q8IZQ1 3526 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 KRTCAP2Q8N6L1 136 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 ANKRD53Q8N9V6 530 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 GLB1L3Q8NCI6 653 aaPredicted RBP12.94□□□□□ -0.34
PTN-202ENST00000393083 RCBTB1Q8NDN9 531 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 CHTF18Q8WVB6 975 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 ROPN1LQ96C74 230 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 TGM7Q96PF1 710 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 DPH7Q9BTV6 452 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 STRADBQ9C0K7 418 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 NRSN2Q9GZP1 204 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 OR51B5Q9H339 312 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 TMEM184CQ9NVA4 438 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 SEMA5BQ9P283 1151 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 LEF1Q9UJU2 399 aaPredicted RBP12.94□□□□□ -0.34
PTN-202ENST00000393083 PPT2Q9UMR5 302 aa12.94□□□□□ -0.34
PTN-202ENST00000393083 ASPMQ8IZT6 3477 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 AKAP13Q12802 2813 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 CCDC187A0A096LP49 1063 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 GSAPA4D1B5 854 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 PMS2P1A4D2B8 440 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 SAP18O00422 153 aaKnown RBP12.93□□□□□ -0.34
PTN-202ENST00000393083 HAT1O14929 419 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 PCDH7O60245 1069 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 PDE5AO76074 875 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 PCSK2P16519 638 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 UGT2B7P16662 529 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 POLR2CP19387 275 aaPredicted RBP12.93□□□□□ -0.34
PTN-202ENST00000393083 HRH2P25021 359 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 PSME3P61289 254 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 RAE1P78406 368 aaKnown RBP12.93□□□□□ -0.34
PTN-202ENST00000393083 OOSP2Q86WS3 158 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 TBC1D19Q8N5T2 526 aa12.93□□□□□ -0.34
PTN-202ENST00000393083 CDC26Q8NHZ8 85 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms