RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 NUFIP1Q9UHK0 495 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SERPINB13Q9UIV8 391 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 FBXL4Q9UKA2 621 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PRDM4Q9UKN5 801 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ITGB1BP2Q9UKP3 347 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF346Q9UL40 294 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MTUS1Q9ULD2 1270 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 FZR1Q9UM11 496 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PRPF19Q9UMS4 504 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CORO2BQ9UQ03 480 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PDE10AQ9Y233 779 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 WDR83OSQ9Y284 106 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MAN2B2Q9Y2E5 1009 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 C22orf24Q9Y442 160 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 RIPOR2Q9Y4F9 1068 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 DTNAQ9Y4J8 743 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ATG4BQ9Y4P1 393 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CDH10Q9Y6N8 788 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 U3KQK5 164 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PKHD1L1Q86WI1 4243 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 KMT2EQ8IZD2 1858 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CENPJQ9HC77 1338 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PLECQ15149 4684 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 DCHS2Q6V1P9 2916 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ABCA12Q86UK0 2595 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 COL6A3P12111 3177 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV3-7A0A075B6H7 116 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 IGLV10-54A0A075B6I4 117 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV1D-8A0A087WSZ0 117 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 PNMA6EA0A0J9YXQ4 647 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 TEX48A0A1B0GUV7 120 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SH3PXD2BA1X283 911 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MYBPHLA2RUH7 354 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 PI4KAP2A4QPH2 592 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ANKRD61A6NGH8 418 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC15A5A6NIM6 579 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 AGAP5A6NIR3 686 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 EIF4E1BA6NMX2 242 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 GJE1A6NN92 205 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC38A8A6NNN8 435 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF850A8MQ14 1090 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 A8MUA0 341 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 C4orf51C9J302 202 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 J3KTA2 159 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 LGALS9O00182 355 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SAP18O00422 153 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 GAPDHSO14556 408 aaPredicted RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 APAF1O14727 1248 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 TNFSF12O43508 249 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 NUDT21O43809 227 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ANGPTL7O43827 346 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF73O43830 326 aaPredicted RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 KIF5CO60282 957 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ERAL1O75616 437 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SUPT7LO94864 414 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 GJB5O95377 273 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 LCA5LO95447 670 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 KLF8O95600 359 aaPredicted RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MLYCDO95822 493 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 GNA14O95837 355 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC16A8O95907 504 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 FTCDO95954 541 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 PGK1P00558 417 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 F9P00740 461 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ADAP00813 363 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 CD74P04233 296 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SEMG1P04279 462 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 RPLP0P05388 317 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 GPX1P07203 203 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ALPIP09923 528 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SRGAP2BP0DMP2 458 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 KITP10721 976 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 P4HA1P13674 534 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 HRES1P13985 223 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC2A4P14672 509 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 IDEP14735 1019 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 FOLR1P15328 257 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 CYP11B1P15538 503 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 CD1DP15813 335 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 HSPA6P17066 643 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 GOT1P17174 413 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 PSMC3P17980 439 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 TCN2P20062 427 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 AGAP20933 346 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 HOXA9P31269 272 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SFTPDP35247 375 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 UGT1A3P35503 534 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 UGT1A5P35504 534 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 HMGCLP35914 325 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 GLP1RP43220 463 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 PSMC4P43686 418 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 XCR1P46094 333 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 OR3A2P47893 321 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 TRAPPC10P48553 1259 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 POU3F4P49335 361 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 BLKP51451 505 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 APOC4P55056 127 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MTTPP55157 894 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MAZP56270 477 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 RPS16P62249 146 aaKnown RBP-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms