RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 WDR54Q9H977 334 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 HCN3Q9P1Z3 774 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 ZNF282Q9UDV7 671 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 ZFP69BQ9UJL9 534 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 NXT1Q9UKK6 140 aaKnown RBP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 KCNMB2Q9Y691 235 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 ANKRD17O75179 2603 aaKnown RBP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 TLDC2A0PJX2 215 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 LRRC14BA6NHZ5 514 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 VSTM2BA6NLU5 285 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 H0YIG0 161 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 SGK494L7N484 410 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 PRAMEF4O60810 478 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 RDH16O75452 317 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 SIX3O95343 332 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-202ENST00000380747 B3GALT4O96024 378 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 UMODP07911 640 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 EPB42P16452 691 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 KRT15P19012 456 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 EPORP19235 508 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 AHRP35869 848 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 ALDH18A1P54886 795 aaKnown RBP8.75□□□□□ -1.01
HMGN1-202ENST00000380747 RAB8AP61006 207 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 KCNAB2Q13303 367 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 LAPTM5Q13571 262 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 ATP1A4Q13733 1029 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 LAPTM4AQ15012 233 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 RBBP7Q16576 425 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 VWA2Q5GFL6 755 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 PAGE2BQ5JRK9 111 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 PRAMEF9Q5VWM5 478 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 CPZQ66K79 652 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 TMIGD1Q6UXZ0 262 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 PRSS41Q7RTY9 318 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 PPP1R32Q7Z5V6 425 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 MRGPREQ86SM8 312 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 MYLK4Q86YV6 388 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-202ENST00000380747 AMER3Q8N944 861 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 TRPV3Q8NET8 790 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 TTLQ8NG68 377 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 OR2W6PQ8NHA6 318 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 ADAMTS17Q8TE56 1095 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 EPS8L3Q8TE67 593 aaKnown RBP8.75□□□□□ -1.01
HMGN1-202ENST00000380747 CREB3L4Q8TEY5 395 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 AENQ8WTP8 325 aaKnown RBP8.75□□□□□ -1.01
HMGN1-202ENST00000380747 PHF21BQ96EK2 531 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 PTCD3Q96EY7 689 aaKnown RBP8.75□□□□□ -1.01
HMGN1-202ENST00000380747 MRPL57Q9BQC6 102 aaKnown RBP8.75□□□□□ -1.01
HMGN1-202ENST00000380747 EFCAB11Q9BUY7 163 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 PARD6BQ9BYG5 372 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 MRPL46Q9H2W6 279 aaKnown RBP8.75□□□□□ -1.01
HMGN1-202ENST00000380747 EHD1Q9H4M9 534 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 MKKSQ9NPJ1 570 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-202ENST00000380747 ACSS2Q9NR19 701 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 C14orf105Q9NVL8 296 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 TMCO1Q9UM00 188 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 NAALAD2Q9Y3Q0 740 aa8.75□□□□□ -1.01
HMGN1-202ENST00000380747 TNPO3Q9Y5L0 923 aaKnown RBP8.75□□□□□ -1.01
HMGN1-202ENST00000380747 A0A1W2PPM1 405 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 URADA6NGE7 173 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ZNF860A6NHJ4 632 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ANKDD1BA6NHY2 528 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 FOXO6A8MYZ6 492 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 KLK8O60259 260 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 DNAJB5O75953 348 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 KLHL18O94889 574 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 NSA2O95478 260 aaKnown RBP8.74□□□□□ -1.01
HMGN1-202ENST00000380747 IGHEP01854 428 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 HEXBP07686 556 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ZGLP1P0C6A0 271 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ZNF888P0CJ79 500 aaPredicted RBP8.74□□□□□ -1.01
HMGN1-202ENST00000380747 PCNAP12004 261 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ALOX12P18054 663 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 CD22P20273 847 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 MMP11P24347 488 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 EEF1DP29692 281 aaKnown RBP8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ARL1P40616 181 aaPredicted RBP8.74□□□□□ -1.01
HMGN1-202ENST00000380747 CASRP41180 1078 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 CCL11P51671 97 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 EMP2P54851 167 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 STXBP1P61764 594 aaKnown RBP8.74□□□□□ -1.01
HMGN1-202ENST00000380747 KLC1Q07866 573 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 IFFO1Q0D2I5 559 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 GTF2H2Q13888 395 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 HERC3Q15034 1050 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 PCBP2Q15366 365 aaKnown RBP eCLIP8.74□□□□□ -1.01
HMGN1-202ENST00000380747 TBCCQ15814 346 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 DEFB134Q4QY38 66 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 MFSD4BQ5TF39 518 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 GTF2H2CQ6P1K8 395 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 EMBQ6PCB8 327 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ABHD13Q7L211 337 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 GOLGA7Q7Z5G4 137 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 PDSS2Q86YH6 399 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 TDRPQ86YL5 185 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ACMSDQ8TDX5 336 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 UTP15Q8TED0 518 aaKnown RBP8.74□□□□□ -1.01
HMGN1-202ENST00000380747 MZB1Q8WU39 189 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 WDR34Q96EX3 536 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 IP6K3Q96PC2 410 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms