RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 PLAGL1Q9UM63 463 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 PCYT1BQ9Y5K3 369 aaPredicted RBP12.09□□□□□ -0.47
VPS16-202ENST00000380445 COL4A3Q01955 1670 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 CCDC85CA6NKD9 419 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 SAP18O00422 153 aaKnown RBP12.09□□□□□ -0.47
VPS16-202ENST00000380445 SLC16A6O15403 523 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 SUV39H1O43463 412 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 UGT2B11O75310 529 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 FPR1P21462 350 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 PCSK6P29122 969 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 WASP42768 502 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 HBA1P69905 142 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 SHHQ15465 462 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 ZNF385BQ569K4 471 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 ATAT1Q5SQI0 421 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 ZNF362Q5T0B9 420 aaPredicted RBP12.09□□□□□ -0.47
VPS16-202ENST00000380445 ZNF776Q68DI1 518 aaPredicted RBP12.09□□□□□ -0.47
VPS16-202ENST00000380445 TRIM40Q6P9F5 258 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 ZNF773Q6PK81 442 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 ANGPTL8Q6UXH0 198 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 TMEM179BQ7Z7N9 219 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 CLVS1Q8IUQ0 354 aaPredicted RBP12.09□□□□□ -0.47
VPS16-202ENST00000380445 SDR16C5Q8N3Y7 309 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 OR52N2Q8NGI0 321 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 WDR48Q8TAF3 677 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 QRFPRQ96P65 431 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 AMBRA1Q9C0C7 1298 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 WASH6PQ9NQA3 447 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 TAC3Q9UHF0 121 aa12.09□□□□□ -0.47
VPS16-202ENST00000380445 MYO1GB0I1T2 1018 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 CBFA2T3O75081 653 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 GBAP04062 536 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 PRKACGP22612 351 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 IGFBP5P24593 272 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 ELK4P28324 431 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 CRATP43155 626 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 TNFRSF4P43489 277 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 CCR8P51685 355 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 RPS21P63220 83 aaKnown RBP12.08□□□□□ -0.48
VPS16-202ENST00000380445 RELAQ04206 551 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 DMPKQ09013 629 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 SGCGQ13326 291 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 GAB1Q13480 694 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 ELOAQ14241 798 aaKnown RBP12.08□□□□□ -0.48
VPS16-202ENST00000380445 BROXQ5VW32 411 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 PPP2R2DQ66LE6 453 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 ANKRD54Q6NXT1 300 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 SLC9B2Q86UD5 537 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 LMNTD1Q8N9Z9 388 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 ZNF740Q8NDX6 193 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 SETD9Q8NE22 299 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 OR4K1Q8NGD4 311 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 ZNF420Q8TAQ5 688 aaPredicted RBP12.08□□□□□ -0.48
VPS16-202ENST00000380445 KXD1Q9BQD3 176 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 SLC35A5Q9BS91 424 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 TRMT61BQ9BVS5 477 aaKnown RBP12.08□□□□□ -0.48
VPS16-202ENST00000380445 ACAT2Q9BWD1 397 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 ADNPQ9H2P0 1102 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 NT5DC2Q9H857 520 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 REEP1Q9H902 201 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 POLR1BQ9H9Y6 1135 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 MIEF1Q9NQG6 463 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 TAS2R9Q9NYW1 312 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 ABCG2Q9UNQ0 655 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 A0A1W2PP55 124 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 KCNJ13O60928 360 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 KRT75O95678 551 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 C6orf47O95873 294 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 ITGAMP11215 1152 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 SHMT2P34897 504 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 RYKP34925 604 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 PBX2P40425 430 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 CLCNKAP51800 687 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 PPP1R8Q12972 351 aaKnown RBP12.08□□□□□ -0.48
VPS16-202ENST00000380445 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.08□□□□□ -0.48
VPS16-202ENST00000380445 DEPDC1Q5TB30 811 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 KCTD8Q6ZWB6 473 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 CACUL1Q86Y37 369 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 NAGSQ8N159 534 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 ABHD11Q8NFV4 315 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 CNDP2Q96KP4 475 aaKnown RBP12.08□□□□□ -0.48
VPS16-202ENST00000380445 DOHHQ9BU89 302 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 C1QTNF7Q9BXJ2 289 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 CXorf21Q9HAI6 301 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 PCDHGA8Q9Y5G5 932 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 ATG2AQ2TAZ0 1938 aa12.08□□□□□ -0.48
VPS16-202ENST00000380445 A0A1W2PRB8 838 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 SH3PXD2BA1X283 911 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 PAK4O96013 591 aaPredicted RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 C1QCP02747 245 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 GSTT2P0CG29 244 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 GSTT2BP0CG30 244 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 GSTM5P46439 218 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 PRIM2P49643 509 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 ITGA1P56199 1179 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 GABARAPL2P60520 117 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 SKIV2LQ15477 1246 aaKnown RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 C6orf141Q5SZD1 244 aa12.07□□□□□ -0.48
VPS16-202ENST00000380445 KHDRBS2Q5VWX1 349 aaKnown RBP12.07□□□□□ -0.48
VPS16-202ENST00000380445 SYCE2Q6PIF2 218 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms