RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 GPATCH11Q8N954 259 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 OR56A3Q8NH54 315 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 NT5CQ8TCD5 201 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 UTP15Q8TED0 518 aaKnown RBP21.62■■□□□ 1.05
U2AF1-202ENST00000380276 ATL1Q8WXF7 558 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 NEIL2Q969S2 332 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 C14orf79Q96F83 325 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 OR4K3Q96R72 315 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 DMRTA2Q96SC8 542 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 SPOCK3Q9BQ16 436 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 PPANQ9NQ55 473 aaKnown RBP21.62■■□□□ 1.05
U2AF1-202ENST00000380276 ZFP69BQ9UJL9 534 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 FBXW2Q9UKT8 454 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 TRBV11-1A0A0K0K1C0 115 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 RNH1P13489 461 aaKnown RBP21.61■■□□□ 1.05
U2AF1-202ENST00000380276 CAPN3P20807 821 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 PGGT1BP53609 377 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 AP1S2P56377 157 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 FGD2Q7Z6J4 655 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 TMPRSS11BQ86T26 416 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 SULF2Q8IWU5 870 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 CHERPQ8IWX8 916 aaKnown RBP21.61■■□□□ 1.05
U2AF1-202ENST00000380276 PPIL6Q8IXY8 311 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 TMEM156Q8N614 296 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 POGLUT1Q8NBL1 392 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 OR4K1Q8NGD4 311 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 NECTIN3Q9NQS3 549 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 PRDM9Q9NQV7 894 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 SLC17A6Q9P2U8 582 aa21.61■■□□□ 1.05
U2AF1-202ENST00000380276 CACNA1CQ13936 2221 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 KLRC4-KLRK1H3BQV0 150 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 CDK2AP1O14519 115 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 ADAM10O14672 748 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 FANCGO15287 622 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 HS6ST1O60243 411 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 BANF1O75531 89 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 GABRB3P28472 473 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 SCTRP47872 440 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 GPR85P60893 370 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 TOR1AIP1Q5JTV8 583 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 ZNF662Q6ZS27 426 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 ZNF227Q86WZ6 799 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 CYP4Z2PQ8N1L4 340 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 FAM57AQ8TBR7 257 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 FBXL8Q96CD0 374 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 SARGQ9BW04 601 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 NEU2Q9Y3R4 380 aa21.6■■□□□ 1.05
U2AF1-202ENST00000380276 TCRBV16S1A1N1A0A5B0 115 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 FAM90A27PA6NNH2 459 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 PEX1O43933 1283 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 MYO1DO94832 1006 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 AHSGP02765 367 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 TRHRP34981 398 aaPredicted RBP21.59■■□□□ 1.05
U2AF1-202ENST00000380276 CLCN2P51788 898 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 PPP1R7Q15435 360 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 SPANXN3Q5MJ09 141 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 GRK7Q8WTQ7 553 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 AIF1LQ9BQI0 150 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 KLHL31Q9H511 634 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 MCCC2Q9HCC0 563 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 PNO1Q9NRX1 252 aaKnown RBP21.59■■□□□ 1.05
U2AF1-202ENST00000380276 ZFATQ9P243 1243 aa21.59■■□□□ 1.05
U2AF1-202ENST00000380276 USP27XA6NNY8 438 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 PDE9AO76083 593 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 SAT1P21673 171 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 AHRP35869 848 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 REEP5Q00765 189 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 HECTD2Q5U5R9 776 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 STRA8Q7Z7C7 330 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 RASGEF1CQ8N431 466 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 NFAM1Q8NET5 270 aaPredicted RBP21.58■■□□□ 1.05
U2AF1-202ENST00000380276 TRPV3Q8NET8 790 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 PDLIM2Q96JY6 352 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 PBKQ96KB5 322 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 NAP1L3Q99457 506 aaPredicted RBP21.58■■□□□ 1.05
U2AF1-202ENST00000380276 ENKD1Q9H0I2 346 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 TRIM45Q9H8W5 580 aaPredicted RBP21.58■■□□□ 1.05
U2AF1-202ENST00000380276 ASIC3Q9UHC3 531 aa21.58■■□□□ 1.05
U2AF1-202ENST00000380276 GTF3C1Q12789 2109 aa21.58■■□□□ 1.04
U2AF1-202ENST00000380276 F8P00451 2351 aa21.58■■□□□ 1.04
U2AF1-202ENST00000380276 TTC4O95801 387 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 TFEBP19484 476 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 BBS9Q3SYG4 887 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 RNASEH2BQ5TBB1 312 aaKnown RBP21.57■■□□□ 1.04
U2AF1-202ENST00000380276 TMEM211Q6ICI0 200 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 THOC6Q86W42 341 aaKnown RBP21.57■■□□□ 1.04
U2AF1-202ENST00000380276 CA13Q8N1Q1 262 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 ANKRD53Q8N9V6 530 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 B3GNT7Q8NFL0 401 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 CCT6BQ92526 530 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 CERS2Q96G23 380 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 FAR2Q96K12 515 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 CCDC77Q9BR77 488 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 SLC6A16Q9GZN6 736 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 PELI2Q9HAT8 420 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 ERVK-11Q9UQG0 969 aa21.57■■□□□ 1.04
U2AF1-202ENST00000380276 A0A0G2JN53 185 aa21.56■■□□□ 1.04
U2AF1-202ENST00000380276 CTAGE15A4D2H0 777 aa21.56■■□□□ 1.04
U2AF1-202ENST00000380276 PGRMC1O00264 195 aaKnown RBP21.56■■□□□ 1.04
U2AF1-202ENST00000380276 ITGA10O75578 1167 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms