RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 RNF31Q96EP0 1072 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 FAR2Q96K12 515 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 MECRQ9BV79 373 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 GATA5Q9BWX5 397 aaPredicted RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 MS4A8Q9BY19 250 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 ROGDIQ9GZN7 287 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 SLC26A1Q9H2B4 701 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 WDR54Q9H977 334 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 EML4Q9HC35 981 aaKnown RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 MID1IP1Q9NPA3 183 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 NXT1Q9UKK6 140 aaKnown RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 FARSAQ9Y285 508 aaKnown RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 NAALAD2Q9Y3Q0 740 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 PPP6CO00743 305 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 TERTO14746 1132 aaKnown RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 ATP8B1O43520 1251 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 CRCPO75575 148 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 SASH3O75995 380 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 OR4F21O95013 312 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 MED26O95402 600 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 RECKO95980 971 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 CAPN1P07384 714 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 ZNF888P0CJ79 500 aaPredicted RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 SMIM10L1P0DMW3 83 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 NEFHP12036 1026 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 LIFP15018 202 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 IL1RNP18510 177 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 IL10P22301 178 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 PTPN4P29074 926 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 HMOX2P30519 316 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 HNRNPH1P31943 449 aaKnown RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 TSFMP43897 325 aaKnown RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 OR1D4P47884 311 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 MC1RQ01726 317 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 OCA2Q04671 838 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 TLE3Q04726 772 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 CUL3Q13618 768 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 DDX39BQ13838 428 aaKnown RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 MPP2Q14168 576 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 DEPDC1Q5TB30 811 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 MLIPQ5VWP3 458 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 KHDRBS2Q5VWX1 349 aaKnown RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 MRPL14Q6P1L8 145 aaKnown RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 C19orf48Q6RUI8 117 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 FAM198BQ6UWH4 519 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 CCDC81Q6ZN84 652 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 SYVN1Q86TM6 617 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 CDYL2Q8N8U2 506 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 ANKRD42Q8N9B4 389 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 OR9A4Q8NGU2 314 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 METTL6Q8TCB7 284 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 SELENOMQ8WWX9 145 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 SMIM10Q96HG1 83 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 SLC45A3Q96JT2 553 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 KCNC2Q96PR1 638 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 MTERF1Q99551 399 aaKnown RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 SERPINI1Q99574 410 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 AKIRIN1Q9H9L7 192 aaPredicted RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 BRF2Q9HAW0 419 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 MKKSQ9NPJ1 570 aaPredicted RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 DMRT3Q9NQL9 472 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 ACSS2Q9NR19 701 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 NMRK1Q9NWW6 199 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 ZNF282Q9UDV7 671 aaPredicted RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 ZNF225Q9UK10 706 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 MRPS2Q9Y399 296 aaKnown RBP11.31□□□□□ -0.6
PCNA-201ENST00000379143 MAP4K5Q9Y4K4 846 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 MAU2Q9Y6X3 613 aa11.31□□□□□ -0.6
PCNA-201ENST00000379143 SPTBP11277 2137 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 A0A1B0GTL3 188 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 MAGEB17A8MXT2 336 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 UBFD1O14562 309 aaKnown RBP11.3□□□□□ -0.6
PCNA-201ENST00000379143 FFAR3O14843 346 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 GPR42O15529 346 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 ERI3O43414 337 aaKnown RBP11.3□□□□□ -0.6
PCNA-201ENST00000379143 GALR3O60755 368 aaPredicted RBP11.3□□□□□ -0.6
PCNA-201ENST00000379143 ULK1O75385 1050 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 KLHL18O94889 574 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 TBX6O95947 436 aaPredicted RBP11.3□□□□□ -0.6
PCNA-201ENST00000379143 TGFB1P01137 390 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 HSD3B1P14060 373 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 ITGAXP20702 1163 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 GRK2P25098 689 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 HSD3B2P26439 372 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 TMPRSS3P57727 454 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 RAB8AP61006 207 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 RCN2Q14257 317 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 COL28A1Q2UY09 1125 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 DEFB134Q4QY38 66 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 CRTC2Q53ET0 693 aaPredicted RBP11.3□□□□□ -0.6
PCNA-201ENST00000379143 TTMPQ5BVD1 217 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 ADNP2Q6IQ32 1131 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 LCN10Q6JVE6 187 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 VASH2Q86V25 355 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 METTL27Q8N6F8 245 aaPredicted RBP11.3□□□□□ -0.6
PCNA-201ENST00000379143 ENDOVQ8N8Q3 282 aaKnown RBP11.3□□□□□ -0.6
PCNA-201ENST00000379143 PAIP2Q9BPZ3 127 aaKnown RBP11.3□□□□□ -0.6
PCNA-201ENST00000379143 TBCDQ9BTW9 1192 aa11.3□□□□□ -0.6
PCNA-201ENST00000379143 NPLQ9BXD5 320 aaPredicted RBP11.3□□□□□ -0.6
PCNA-201ENST00000379143 MFRPQ9BY79 579 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms