RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 MYO1DO94832 1006 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 TRHRP34981 398 aaPredicted RBP16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 CCR8P51685 355 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 RAB8AP61006 207 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 SKP1P63208 163 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 SARNPP82979 210 aaKnown RBP16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 RGS1Q08116 209 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 SNTB1Q13884 538 aaKnown RBP16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 ANKRD22Q5VYY1 191 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 ARHGAP11AQ6P4F7 1023 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 LCTLQ6UWM7 567 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 AFAP1L2Q8N4X5 818 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 EEF1AKMT1Q8WVE0 214 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 PWWP2AQ96N64 755 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 TRIM45Q9H8W5 580 aaPredicted RBP16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 NECTIN3Q9NQS3 549 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 PNO1Q9NRX1 252 aaKnown RBP16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 C20orf96Q9NUD7 363 aaPredicted RBP16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 CCM2LQ9NUG4 571 aaPredicted RBP16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 KCMF1Q9P0J7 381 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 KLHL42Q9P2K6 505 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 ERVK-11Q9UQG0 969 aa16.6■□□□□ 0.25
PDLIM4-202ENST00000379018 PABPN1LA6NDY0 278 aaKnown RBP16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 G3V3Y1 287 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 ITGA10O75578 1167 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 HAUS5O94927 633 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 HOXD4P09016 255 aaPredicted RBP16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 PPP2R2AP63151 447 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 CDK16Q00536 496 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 GPS1Q13098 491 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 PHKG1Q16816 387 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 C16orf47Q6ZP98 133 aaPredicted RBP16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 QSOX2Q6ZRP7 698 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 ABHD13Q7L211 337 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 ARMC2Q8NEN0 867 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 NFAM1Q8NET5 270 aaPredicted RBP16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 TMUB1Q9BVT8 246 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 SGPP1Q9BX95 441 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 FAM129AQ9BZQ8 928 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 SPNS1Q9H2V7 528 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 LIN28AQ9H9Z2 209 aaKnown RBP16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 DNAJB12Q9NXW2 375 aaKnown RBP16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 KCNN3Q9UGI6 736 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 MAD1L1Q9Y6D9 718 aa16.59■□□□□ 0.25
PDLIM4-202ENST00000379018 ACANP16112 2415 aa16.58■□□□□ 0.25
PDLIM4-202ENST00000379018 FAM237BA0A1B0GVD1 139 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 FGGP02679 453 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 C8GP07360 202 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 NPPBP16860 134 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 HOXB4P17483 251 aaPredicted RBP16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 CCND1P24385 295 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 RGS4P49798 205 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 CLCN2P51788 898 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 PPIAP62937 165 aaKnown RBP16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 CEBPEQ15744 281 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 EMC4Q5J8M3 183 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 CATSPEREQ5SY80 951 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 ZNF585AQ6P3V2 769 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 CAND1Q86VP6 1230 aaKnown RBP16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 TMEM139Q8IV31 216 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 CLYBLQ8N0X4 340 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 MYO1HQ8N1T3 1032 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 TBC1D19Q8N5T2 526 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 ZFP62Q8NB50 900 aaPredicted RBP16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 C16orf52Q8NHV5 167 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 PDLIM2Q96JY6 352 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 TSNARE1Q96NA8 513 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 HAUS8Q9BT25 410 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 AARSD1Q9BTE6 412 aaKnown RBP16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 PARVBQ9HBI1 364 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 TIMMDC1Q9NPL8 285 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 PRDM9Q9NQV7 894 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 PNPLA3Q9NST1 481 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 DEPPQ9NTK1 212 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 FBXO5Q9UKT4 447 aa16.58■□□□□ 0.24
PDLIM4-202ENST00000379018 MAP1AP78559 2803 aaPredicted RBP16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 A0A0G2JMM0 328 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 ZCWPW2A0A1B0GU75 182 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 A0A1W2PPB8 328 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 A0A1W2PRS3 328 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 TCRBV16S1A1N1A0A5B0 115 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 TRBC2A0A5B9 178 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 PINLYPA6NC86 204 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 KIR3DP1A8MWS1 328 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 TUBB4AP04350 444 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 HIST1H2AGP0C0S8 130 aaPredicted RBP16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 RNH1P13489 461 aaKnown RBP16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 KLK2P20151 261 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 HIST1H2ADP20671 130 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 SSR4P51571 173 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 DHX9Q08211 1270 aaKnown RBP16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 PWP1Q13610 501 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 DRICH1Q6PGQ1 229 aaPredicted RBP16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 PAOXQ6QHF9 649 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 ACAD11Q709F0 780 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 TGIF2LYQ8IUE0 185 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 ZZZ3Q8IYH5 903 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 CHDHQ8NE62 594 aaPredicted RBP16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 B3GNT7Q8NFL0 401 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 UTP15Q8TED0 518 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms