RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 SDSLQ96GA7 329 aa15.8■□□□□ 0.12
RGP1-201ENST00000378078 C7orf34Q96L11 122 aa15.8■□□□□ 0.12
RGP1-201ENST00000378078 PIP5K1AQ99755 562 aa15.8■□□□□ 0.12
RGP1-201ENST00000378078 RCOR3Q9P2K3 495 aaPredicted RBP15.8■□□□□ 0.12
RGP1-201ENST00000378078 ZNF705EA8MWA4 302 aaPredicted RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 XRCC1P18887 633 aaPredicted RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 GRIA1P42261 906 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 LIMK2P53671 638 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 OR4N5Q8IXE1 308 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 STOML3Q8TAV4 291 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 TARBP1Q13395 1621 aaKnown RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 GGT2P36268 569 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 SYCE2Q6PIF2 218 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 LRFN4Q6PJG9 635 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 RCBTB1Q8NDN9 531 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 SLC22A17Q8WUG5 538 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 SORCS1Q8WY21 1168 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 SRA1Q9HD15 236 aaKnown RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 ASB6Q9NWX5 421 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 JUNDP17535 347 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 POU3F4P49335 361 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 KCTD13Q8WZ19 329 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 MAP3K3Q99759 626 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 STARD5Q9NSY2 213 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 HEMK1Q9Y5R4 338 aaPredicted RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 PTGS2P35354 604 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 PGAM4Q8N0Y7 254 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 OR4K1Q8NGD4 311 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 KCTD7Q96MP8 289 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 EIF5A2Q9GZV4 153 aaKnown RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 PCDHGA10Q9Y5H3 936 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 PPRC1Q5VV67 1664 aaKnown RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 A0A0D9SEW6 157 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 ATE1O95260 518 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 AHSA1O95433 338 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 H1F0P07305 194 aaKnown RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 PEPDP12955 493 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 GJA5P36382 358 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 STK19P49842 368 aaPredicted RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 PSMA6P60900 246 aaKnown RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 DEFB110Q30KQ9 67 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 GPR157Q5UAW9 335 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 LRRC55Q6ZSA7 311 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 CPNE8Q86YQ8 564 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 TTLQ8NG68 377 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 NECAB3Q96P71 396 aaPredicted RBP15.79■□□□□ 0.12
RGP1-201ENST00000378078 POLE4Q9NR33 117 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 NLGN3Q9NZ94 848 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 RPH3ALQ9UNE2 315 aa15.79■□□□□ 0.12
RGP1-201ENST00000378078 PRORSD1PA6NEY8 169 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 HNF1BP35680 557 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 RPA4Q13156 261 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 LTC4SQ16873 150 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 SMURF2Q9HAU4 748 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 TAS2R1Q9NYW7 299 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 EDF1O60869 148 aaKnown RBP15.78■□□□□ 0.12
RGP1-201ENST00000378078 ZBTB48P10074 688 aaPredicted RBP15.78■□□□□ 0.12
RGP1-201ENST00000378078 ASPAP45381 313 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 LSSP48449 732 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 OR4D2P58180 307 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 CD180Q99467 661 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 EBF4Q9BQW3 602 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 PAK6Q9NQU5 681 aaPredicted RBP15.78■□□□□ 0.12
RGP1-201ENST00000378078 FLRT1Q9NZU1 646 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 OR1A2Q9Y585 309 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 PDYNP01213 254 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 MYH10P35580 1976 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 CHRM1P11229 460 aaPredicted RBP15.78■□□□□ 0.12
RGP1-201ENST00000378078 AGTR2P50052 363 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 ZNF84P51523 738 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 SMAD2Q15796 467 aaKnown RBP15.78■□□□□ 0.12
RGP1-201ENST00000378078 NPTX1Q15818 432 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 C3orf38Q5JPI3 329 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 PGAM5Q96HS1 289 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 CCDC28BQ9BUN5 200 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 AKTIPQ9H8T0 292 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 ANKRA2Q9H9E1 313 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 SH3PXD2BA1X283 911 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 RAD1O60671 282 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 CD97P48960 835 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 RAB28P51157 221 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 SOWAHAQ2M3V2 549 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 SLC16A9Q7RTY1 509 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 C16orf58Q96GQ5 468 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 TMEM74Q96NL1 305 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 TRIM64CA6NLI5 447 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 ARL2P36404 184 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 ZC3H14Q6PJT7 736 aaKnown RBP15.78■□□□□ 0.12
RGP1-201ENST00000378078 FUZQ9BT04 418 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 DNTTIP1Q9H147 329 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 SLC7A11Q9UPY5 501 aa15.78■□□□□ 0.12
RGP1-201ENST00000378078 DUXAA6NLW8 204 aa15.77■□□□□ 0.12
RGP1-201ENST00000378078 ETV3P41162 512 aa15.77■□□□□ 0.12
RGP1-201ENST00000378078 SSTP61278 116 aa15.77■□□□□ 0.12
RGP1-201ENST00000378078 SVOPLQ8N434 492 aa15.77■□□□□ 0.12
RGP1-201ENST00000378078 CKMT1AP12532 417 aa15.77■□□□□ 0.12
RGP1-201ENST00000378078 NPR2P20594 1047 aa15.77■□□□□ 0.12
RGP1-201ENST00000378078 EEFSECP57772 596 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms