RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PPP3R1P63098 170 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 CD83Q01151 205 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 NPRL3Q12980 569 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 NFATC2Q13469 925 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 ANKDD1AQ495B1 522 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 PM20D1Q6GTS8 502 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 TICAM1Q8IUC6 712 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 OR5AK3PQ8NH89 298 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 FBXO27Q8NI29 283 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 FAM110BQ8TC76 370 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 ERLEC1Q96DZ1 483 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 FUNDC2Q9BWH2 189 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 OSER1Q9NX31 292 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 CDC14AQ9UNH5 594 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 UPK3BL1B0FP48 263 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 UPK3BL2E5RIL1 263 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 ARVCFO00192 962 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 SAP18O00422 153 aaKnown RBP8.1□□□□□ -1.11
VPS36-201ENST00000378060 CCL16O15467 120 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 CAPN5O15484 640 aaPredicted RBP8.1□□□□□ -1.11
VPS36-201ENST00000378060 ARHGEF15O94989 841 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 PCCBP05166 539 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 GIMD1P0DJR0 217 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 ZNF3P17036 446 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 ACVR2AP27037 513 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 STT3AP46977 705 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 AVPR1BP47901 424 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 NRIP1P48552 1158 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 INHBCP55103 352 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 RAB2AP61019 212 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 PTPRCAPQ14761 206 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 AKIRIN2Q53H80 203 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 PLPP4Q5VZY2 271 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 UGT2A3Q6UWM9 527 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 CTU1Q7Z7A3 348 aaKnown RBP8.1□□□□□ -1.11
VPS36-201ENST00000378060 ALDH16A1Q8IZ83 802 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 TCEANCQ8N8B7 351 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 OR8J1Q8NGP2 316 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 GPR151Q8TDV0 419 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 SH3RF2Q8TEC5 729 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 NRG4Q8WWG1 115 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 CREB3L1Q96BA8 519 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 NUS1Q96E22 293 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 ZNF597Q96LX8 424 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 SORT1Q99523 831 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 MNTQ99583 582 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 LGR4Q9BXB1 951 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 ADAP2Q9NPF8 381 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 FKBP7Q9Y680 259 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 MTMR11A4FU01 709 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 TPD52L2O43399 206 aaKnown RBP8.1□□□□□ -1.11
VPS36-201ENST00000378060 MTRF1O75570 445 aaKnown RBP8.1□□□□□ -1.11
VPS36-201ENST00000378060 MPC1LP0DKB6 136 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 GGT1P19440 569 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 CASP9P55211 416 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 SH3BP2P78314 561 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 TRAM2Q15035 370 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 XKR4Q5GH76 650 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 KANK2Q63ZY3 851 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 PSRC1Q6PGN9 363 aaPredicted RBP8.1□□□□□ -1.11
VPS36-201ENST00000378060 ARL9Q6T311 187 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 SLC36A4Q6YBV0 504 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 ANKRD13BQ86YJ7 626 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 MFSD2AQ8NA29 543 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 SLC37A3Q8NCC5 494 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 OR10Q1Q8NGQ4 319 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 CEP76Q8TAP6 659 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 SLC5A11Q8WWX8 675 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 THRSPQ92748 146 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 OSTF1Q92882 214 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 GPER1Q99527 375 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 MGLLQ99685 303 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 IGFLR1Q9H665 355 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 SOX17Q9H6I2 414 aaPredicted RBP8.1□□□□□ -1.11
VPS36-201ENST00000378060 CPNE5Q9HCH3 593 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 TAS2R9Q9NYW1 312 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 ERVK-18Q9QC07 812 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 EBF1Q9UH73 591 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 REV3LO60673 3130 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 A0A0J9YVX5 310 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 AURKAO14965 403 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 POP7O75817 140 aaKnown RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 RETP07949 1114 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 STOMP27105 288 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 RBM34P42696 430 aaKnown RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 MAGEA8P43361 318 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 CLCA4Q14CN2 919 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 LRRC66Q68CR7 880 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 ASB18Q6ZVZ8 466 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 TMCO2Q7Z6W1 182 aaPredicted RBP8.09□□□□□ -1.11
VPS36-201ENST00000378060 LRRTM4Q86VH4 590 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 CHST4Q8NCG5 386 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 OR14C36Q8NHC7 312 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 CNIH3Q8TBE1 160 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 TSSK6Q9BXA6 273 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 HAPLN2Q9GZV7 340 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 TMLHEQ9NVH6 421 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 MS4A12Q9NXJ0 267 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D24Q9ULP9 559 aa8.09□□□□□ -1.11
VPS36-201ENST00000378060 TMEM5Q9Y2B1 443 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms