RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 KDM4BO94953 1096 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 GALTP07902 379 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 DLDP09622 509 aaKnown RBP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 PLEKHS1Q5SXH7 462 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 SLC36A4Q6YBV0 504 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 PQLC3Q8N755 202 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 FAM86B1Q8N7N1 296 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 TM9SF3Q9HD45 589 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 PCP4L1A6NKN8 68 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 CDC40O60508 579 aaKnown RBP eCLIP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 PRKACGP22612 351 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 REEP3Q6NUK4 255 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 ERI1Q8IV48 349 aaKnown RBP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 ZNF384Q8TF68 577 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 CAPN5O15484 640 aaPredicted RBP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 RNF13O43567 381 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 FHP07954 510 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 AOC1P19801 751 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 SHMT2P34897 504 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 PER3P56645 1201 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 PCLAFQ15004 111 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 OR2L2Q8NH16 312 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 SLC7A6OSQ96CW6 309 aaPredicted RBP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 HERC2P3Q9BVR0 1158 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 NPLQ9BXD5 320 aaPredicted RBP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 HRASLS2Q9NWW9 162 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 C14orf166Q9Y224 244 aaKnown RBP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 TMEM5Q9Y2B1 443 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 ALG5Q9Y673 324 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 H7BY64 318 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 FZD9O00144 591 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 LSM1O15116 133 aaKnown RBP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 MAGEA12P43365 314 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 ARF3P61204 181 aaPredicted RBP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 ARF1P84077 181 aaKnown RBP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 BNIP3Q12983 259 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 TIFABQ6ZNK6 161 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 PRAP1Q96NZ9 151 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 TSGA13Q96PP4 275 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 ZNF717Q9BY31 904 aaPredicted RBP18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 TSPAN4O14817 238 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 HSPA12AO43301 675 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 KLHDC10Q6PID8 442 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 OSTF1Q92882 214 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 RAB8BQ92930 207 aa18.36■□□□□ 0.53
TBC1D4-201ENST00000377625 SLC33A1O00400 549 aaPredicted RBP18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 PFKMP08237 780 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 SRCP12931 536 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 CBLP22681 906 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 MAPK3P27361 379 aaPredicted RBP18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 ERMP1Q7Z2K6 904 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 METTL27Q8N6F8 245 aaPredicted RBP18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 THAP6Q8TBB0 222 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 FUZQ9BT04 418 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 HPF1Q9NWY4 346 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 GIMAP2Q9UG22 337 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 ACSL5Q9ULC5 683 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 WASF3Q9UPY6 502 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 TEX13CA0A0J9YWL9 993 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 TRAM2Q15035 370 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 C1orf189Q5VU69 101 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 NOXRED1Q6NXP6 359 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 OR4K1Q8NGD4 311 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 OR4K14Q8NGD5 310 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 FAM83CQ9BQN1 747 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 HCN4Q9Y3Q4 1203 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 TEX13DA0A0J9YY54 714 aaPredicted RBP18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 LEFTY1O75610 366 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 PTNP21246 168 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 MECP2P51608 486 aaKnown RBP18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 ZNF792Q3KQV3 632 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 SLC35F1Q5T1Q4 408 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 TMED4Q7Z7H5 227 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 PEBP4Q96S96 227 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 SGIP1Q9BQI5 828 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 DNAJC27Q9NZQ0 273 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 FXYD6-FXYD2A0A087WZ82 144 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 MAN2A2P49641 1150 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 DSG2Q14126 1118 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 C14orf80Q86SX3 495 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 SHKBP1Q8TBC3 707 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 LRRC20Q8TCA0 184 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 MMABQ96EY8 250 aaPredicted RBP18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 FAM210AQ96ND0 272 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 MCHR1Q99705 422 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 FXYD6Q9H0Q3 95 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 SIX4Q9UIU6 781 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 SLC35F4A4IF30 521 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 NPPAP01160 153 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 CD72P21854 359 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 RHDQ02161 417 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 C1orf21Q9H246 121 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 EHD1Q9H4M9 534 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 REEP4Q9H6H4 257 aa18.35■□□□□ 0.53
TBC1D4-201ENST00000377625 OR6C70A6NIJ9 312 aa18.34■□□□□ 0.53
TBC1D4-201ENST00000377625 COCHO43405 550 aa18.34■□□□□ 0.53
TBC1D4-201ENST00000377625 GLP1RP43220 463 aa18.34■□□□□ 0.53
TBC1D4-201ENST00000377625 AGTR2P50052 363 aa18.34■□□□□ 0.53
TBC1D4-201ENST00000377625 POU6F2P78424 691 aaPredicted RBP18.34■□□□□ 0.53
TBC1D4-201ENST00000377625 KIAA1614Q5VZ46 1190 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms