RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 ILKAPQ9H0C8 392 aaPredicted RBP20.87■□□□□ 0.93
SRM-201ENST00000376957 COPS7BQ9H9Q2 264 aaPredicted RBP20.87■□□□□ 0.93
SRM-201ENST00000376957 TEKT2Q9UIF3 430 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 CFAP46Q8IYW2 2715 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 FASNP49327 2511 aaKnown RBP20.86■□□□□ 0.93
SRM-201ENST00000376957 IQANK1A0A1B0GTG1 560 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 SMIM24O75264 130 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 BTN3A2P78410 334 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 PHEXP78562 749 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 SETDB1Q15047 1291 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 MED27Q6P2C8 311 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 TMEM151BQ8IW70 566 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 PLPP5Q8NEB5 264 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 ADAMTS18Q8TE60 1221 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.86■□□□□ 0.93
SRM-201ENST00000376957 REPS1Q96D71 796 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 CENPKQ9BS16 269 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 NPLQ9BXD5 320 aaPredicted RBP20.86■□□□□ 0.93
SRM-201ENST00000376957 MFRPQ9BY79 579 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 REXO4Q9GZR2 422 aaKnown RBP20.86■□□□□ 0.93
SRM-201ENST00000376957 CLMPQ9H6B4 373 aa20.86■□□□□ 0.93
SRM-201ENST00000376957 CPSF2Q9P2I0 782 aaKnown RBP20.86■□□□□ 0.93
SRM-201ENST00000376957 LRIT2A6NDA9 550 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 MAGEB17A8MXT2 336 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 TRIM49D1C9J1S8 452 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 RIPK2O43353 540 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 ERI3O43414 337 aaKnown RBP20.85■□□□□ 0.93
SRM-201ENST00000376957 JRKO75564 520 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 PRR35P0CG20 571 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 MYBL2P10244 700 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 ABRAXAS2Q15018 415 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 EXT1Q16394 746 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 CHSY3Q70JA7 882 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 MYLK4Q86YV6 388 aaPredicted RBP20.85■□□□□ 0.93
SRM-201ENST00000376957 IQCKQ8N0W5 287 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 TEX9Q8N6V9 391 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 OR2L5Q8NG80 312 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 DCAKDQ8WVC6 231 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 ISL2Q96A47 359 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 LPAR4Q99677 370 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 RHBGQ9H310 441 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 L2HGDHQ9H9P8 463 aa20.85■□□□□ 0.93
SRM-201ENST00000376957 MRPS33Q9Y291 106 aaKnown RBP20.85■□□□□ 0.93
SRM-201ENST00000376957 PCSK5Q92824 1860 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 DYTNA2CJ06 578 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 SYNDIG1LA6NDD5 238 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 MASP2O00187 686 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 CLDN4O14493 209 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 B3GALT2O43825 422 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 PRMT3O60678 531 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 VPS4BO75351 444 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 CDC123O75794 336 aaPredicted RBP20.84■□□□□ 0.93
SRM-201ENST00000376957 MTHFD2P13995 350 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 GMPRP36959 345 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 ARL1P40616 181 aaPredicted RBP20.84■□□□□ 0.93
SRM-201ENST00000376957 PCDH1Q08174 1060 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 HYAL2Q12891 473 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 NAA30Q147X3 362 aaPredicted RBP20.84■□□□□ 0.93
SRM-201ENST00000376957 TEX35Q5T0J7 233 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 LIPJQ5W064 366 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 SLC6A19Q695T7 634 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 LCA5Q86VQ0 697 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 RBMXL3Q8N7X1 1067 aaKnown RBP20.84■□□□□ 0.93
SRM-201ENST00000376957 OR5T3Q8NGG3 340 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 PPP4R1Q8TF05 950 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 MS4A6EQ96DS6 147 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 KCNC2Q96PR1 638 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 WDR77Q9BQA1 342 aaPredicted RBP20.84■□□□□ 0.93
SRM-201ENST00000376957 KLHL31Q9H511 634 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 ACTR8Q9H981 624 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 MAP10Q9P2G4 905 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 FETUBQ9UGM5 382 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 VPS4AQ9UN37 437 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 PCDHGA11Q9Y5H2 935 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 SPACA6W5XKT8 324 aa20.84■□□□□ 0.93
SRM-201ENST00000376957 KLK8O60259 260 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 UGDHO60701 494 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 B4GALT2O60909 372 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 SMIM10L1P0DMW3 83 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 PCNAP12004 261 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 MAGEA12P43365 314 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 PLA2G16P53816 162 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 OLR1P78380 273 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 MFAP5Q13361 173 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 PCOLCEQ15113 449 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 PCBP2Q15366 365 aaKnown RBP eCLIP20.83■□□□□ 0.932e-11■■□□□ 12.3
SRM-201ENST00000376957 BTBD16Q32M84 506 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 TMEM35AQ53FP2 167 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 GRHL2Q6ISB3 625 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 ADGRD1Q6QNK2 874 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 ANKRD37Q7Z713 158 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 DNAJB14Q8TBM8 379 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 CPT1CQ8TCG5 803 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 ATP6V1E2Q96A05 226 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 SMIM10Q96HG1 83 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 PTCHD1Q96NR3 888 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 SERINC2Q96SA4 455 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 MRPL57Q9BQC6 102 aaKnown RBP20.83■□□□□ 0.93
SRM-201ENST00000376957 RBCK1Q9BYM8 510 aa20.83■□□□□ 0.93
SRM-201ENST00000376957 ZNF490Q9ULM2 529 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms