RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 C1QAP02745 245 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 C8GP07360 202 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 NUDT17P0C025 328 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 ABOP16442 354 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 EEF1DP29692 281 aaKnown RBP12.36□□□□□ -0.43
CLCN6-205ENST00000376492 RPA3P35244 121 aaPredicted RBP12.36□□□□□ -0.43
CLCN6-205ENST00000376492 CD96P40200 585 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 IL2P60568 153 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 NAA25Q14CX7 972 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 MINDY4Q4G0A6 757 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 KRTCAP3Q53RY4 240 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 MFSD4BQ5TF39 518 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 GARNL3Q5VVW2 1013 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 ZNF425Q6IV72 752 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 LRIG3Q6UXM1 1119 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 CAPN12Q6ZSI9 719 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 PRSS41Q7RTY9 318 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 PIWIL4Q7Z3Z4 852 aaKnown RBP12.36□□□□□ -0.43
CLCN6-205ENST00000376492 CPEB2Q7Z5Q1 589 aaKnown RBP12.36□□□□□ -0.43
CLCN6-205ENST00000376492 FGD2Q7Z6J4 655 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 DOLPP1Q86YN1 238 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 CRLF3Q8IUI8 442 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 OR9A4Q8NGU2 314 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 METTL21AQ8WXB1 218 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 SMPDL3AQ92484 453 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 CDKL2Q92772 493 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 RERGQ96A58 199 aaPredicted RBP12.36□□□□□ -0.43
CLCN6-205ENST00000376492 SDCCAG3Q96C92 435 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 PDLIM5Q96HC4 596 aaKnown RBP12.36□□□□□ -0.43
CLCN6-205ENST00000376492 ZNF354BQ96LW1 612 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 OLFM1Q99784 485 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 TREX2Q9BQ50 279 aaPredicted RBP12.36□□□□□ -0.43
CLCN6-205ENST00000376492 RHOJQ9H4E5 214 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 KCNK13Q9HB14 408 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 PCDHGB6Q9Y5F9 930 aa12.36□□□□□ -0.43
CLCN6-205ENST00000376492 DNHD1Q96M86 4753 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 ZNF839A8K0R7 811 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 CXorf49A8MYA2 514 aaPredicted RBP12.35□□□□□ -0.43
CLCN6-205ENST00000376492 HAT1O14929 419 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 SLC16A8O95907 504 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 EZRP15311 586 aaKnown RBP12.35□□□□□ -0.43
CLCN6-205ENST00000376492 PNLIPRP1P54315 467 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 SP140Q13342 867 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 PDAP1Q13442 181 aaKnown RBP12.35□□□□□ -0.43
CLCN6-205ENST00000376492 CASP8Q14790 479 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 RASA2Q15283 850 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 RNFT1Q5M7Z0 435 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 ICE2Q659A1 982 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 H3F3CQ6NXT2 135 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 UBE2R2Q712K3 238 aaPredicted RBP12.35□□□□□ -0.43
CLCN6-205ENST00000376492 GALNTL5Q7Z4T8 443 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.35□□□□□ -0.43
CLCN6-205ENST00000376492 CCDC25Q86WR0 208 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 PPFIBP2Q8ND30 876 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 MCOLN3Q8TDD5 553 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 ZNF480Q8WV37 535 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 DMRTA2Q96SC8 542 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 CYTH2Q99418 400 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 CPNE1Q99829 537 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 UTP23Q9BRU9 249 aaKnown RBP12.35□□□□□ -0.43
CLCN6-205ENST00000376492 TMEM109Q9BVC6 243 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 ROPN1BQ9BZX4 212 aaPredicted RBP12.35□□□□□ -0.43
CLCN6-205ENST00000376492 ROPN1Q9HAT0 212 aaPredicted RBP12.35□□□□□ -0.43
CLCN6-205ENST00000376492 PARVBQ9HBI1 364 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 ABCF3Q9NUQ8 709 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 HCN3Q9P1Z3 774 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 PPT2Q9UMR5 302 aa12.35□□□□□ -0.43
CLCN6-205ENST00000376492 FAM95CA0A1B0GW59 222 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 GABRR3A8MPY1 467 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 E7ENX8 843 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 ASNA1O43681 348 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 PIAS1O75925 651 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 MLYCDO95822 493 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 FAM153BP0C7A2 387 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 CD46P15529 392 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 PHBP35232 272 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 ART1P52961 327 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 OC90Q02509 493 aaPredicted RBP12.34□□□□□ -0.43
CLCN6-205ENST00000376492 TAP2Q03519 686 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 FAM153CQ494X1 144 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 ADCK2Q7Z695 626 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 ANKRD37Q7Z713 158 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 LRRC56Q8IYG6 542 aaPredicted RBP12.34□□□□□ -0.43
CLCN6-205ENST00000376492 MYO1HQ8N1T3 1032 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 GHDCQ8N2G8 530 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 CA5BP1Q8WTZ4 195 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 PHF10Q8WUB8 498 aaKnown RBP12.34□□□□□ -0.43
CLCN6-205ENST00000376492 LINGO1Q96FE5 620 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 CCDC138Q96M89 665 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 MACROD1Q9BQ69 325 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 RBCK1Q9BYM8 510 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 ADAMTS6Q9UKP5 1117 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 PDE10AQ9Y233 779 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 ASB1Q9Y576 335 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 SPG11Q96JI7 2443 aa12.34□□□□□ -0.43
CLCN6-205ENST00000376492 E9PLN8 166 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 NEURL1O76050 574 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 NADKO95544 446 aaPredicted RBP12.33□□□□□ -0.44
CLCN6-205ENST00000376492 SYF2O95926 243 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms