RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 IL12RB1P42701 662 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 C21orf58P58505 322 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 SKIV2LQ15477 1246 aaKnown RBP13.43□□□□□ -0.26
MSH5-202ENST00000375740 HKDC1Q2TB90 917 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.43□□□□□ -0.266e-7■■■■□ 21
MSH5-202ENST00000375740 GET4Q7L5D6 327 aaPredicted RBP13.43□□□□□ -0.26
MSH5-202ENST00000375740 TMEM179BQ7Z7N9 219 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 ARMC8Q8IUR7 673 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 PLA2G15Q8NCC3 412 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 SUSD6Q92537 303 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 MUL1Q969V5 352 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 TP53INP1Q96A56 240 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 SH3KBP1Q96B97 665 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 DYRK1BQ9Y463 629 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 PRKAB1Q9Y478 270 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 PCYT1BQ9Y5K3 369 aaPredicted RBP13.43□□□□□ -0.26
MSH5-202ENST00000375740 CHD9Q3L8U1 2897 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 SCAMP2O15127 329 aaKnown RBP13.42□□□□□ -0.26
MSH5-202ENST00000375740 NOBOXO60393 691 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 GPX2P18283 190 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 IL1RNP18510 177 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 SERPINB1P30740 379 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 LBX1P52954 281 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 COPZ1P61923 177 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 CPTPQ5TA50 214 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 TANGO2Q6ICL3 276 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 FAM83HQ6ZRV2 1179 aaPredicted RBP13.42□□□□□ -0.26
MSH5-202ENST00000375740 FKBP9P1Q75LS8 142 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 CHDHQ8NE62 594 aaPredicted RBP13.42□□□□□ -0.26
MSH5-202ENST00000375740 OR6Q1Q8NGQ2 317 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 CXorf40AQ8TE69 158 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 LINC00615Q96LM1 132 aaPredicted RBP13.42□□□□□ -0.26
MSH5-202ENST00000375740 OSBPL10Q9BXB5 764 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 TOR3AQ9H497 397 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 NEK6Q9HC98 313 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 AASSQ9UDR5 926 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 KIAA1549LQ6ZVL6 1849 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 C17orf113A0A1B0GUU1 675 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 SNPHO15079 494 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 EPN2O95208 641 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 CCNDBP1O95273 360 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 C1GALT1C1LP0DN25 315 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 PCMT1P22061 227 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 PRKACGP22612 351 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 P2RY2P41231 377 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 NCS1P62166 190 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 TAP2Q03519 686 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 C6orf141Q5SZD1 244 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 ADHFE1Q8IWW8 467 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 LRRC56Q8IYG6 542 aaPredicted RBP13.42□□□□□ -0.26
MSH5-202ENST00000375740 OR2L2Q8NH16 312 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 ZNF514Q96K75 400 aaPredicted RBP13.42□□□□□ -0.26
MSH5-202ENST00000375740 SGPP1Q9BX95 441 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 PRSS16Q9NQE7 514 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 WDR70Q9NW82 654 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 HCN2Q9UL51 889 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 GPR34Q9UPC5 381 aa13.42□□□□□ -0.26
MSH5-202ENST00000375740 GNG14A0A1W2PPG7 69 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 TNFRSF10AO00220 468 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 NDUFS2O75306 463 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 ZNF682O95780 498 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 HPRP00739 348 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 EIF2S1P05198 315 aaKnown RBP13.41□□□□□ -0.26
MSH5-202ENST00000375740 EPHX1P07099 455 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 IDSP22304 550 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 ACADLP28330 430 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 CD40LGP29965 261 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 OPRD1P41143 372 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 ASMTP46597 345 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 MEF2AQ02078 507 aaPredicted RBP13.41□□□□□ -0.26
MSH5-202ENST00000375740 CD47Q08722 323 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 CNTN1Q12860 1018 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 SLBPQ14493 270 aaKnown RBP eCLIP13.41□□□□□ -0.26
MSH5-202ENST00000375740 HIST2H2ACQ16777 129 aaPredicted RBP13.41□□□□□ -0.26
MSH5-202ENST00000375740 VMACQ2NL98 169 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 SPIN4Q56A73 249 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 SPESP1Q6UW49 350 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 ZZZ3Q8IYH5 903 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 SVOPLQ8N434 492 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 S100ZQ8WXG8 99 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 REPS1Q96D71 796 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 ZDHHC5Q9C0B5 715 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 AMBRA1Q9C0C7 1298 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 PNMA8BQ9ULN7 279 aaPredicted RBP13.41□□□□□ -0.26
MSH5-202ENST00000375740 GPSM3Q9Y4H4 160 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 PCDHB11Q9Y5F2 797 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 PCM1Q15154 2024 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 MGAT4DA6NG13 374 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 M0R3G1 203 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 XPNPEP2O43895 674 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 VEGFDO43915 354 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 CHRNB1P11230 501 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 TIA1P31483 386 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■■■■□ 19.4
MSH5-202ENST00000375740 DCTP40126 519 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 RACK1P63244 317 aaKnown RBP13.41□□□□□ -0.26
MSH5-202ENST00000375740 PPP2R2BQ00005 443 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 PDGFRLQ15198 375 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 DUSP6Q16828 381 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 PAGE2Q7Z2X7 111 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 C11orf96Q7Z7L8 435 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms