RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 GAL3ST1Q99999 423 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 TCRBV3S1A0A5B6 114 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 I3L521 148 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 GNB5O14775 395 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 FKTNO75072 461 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 BCAS1O75363 584 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-203ENST00000375274 RASGRP1O95267 797 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 TFPIP10646 304 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 MAZP56270 477 aaKnown RBP11.14□□□□□ -0.63
PTCH1-203ENST00000375274 ADAM8P78325 824 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 PPIGQ13427 754 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTCH1-203ENST00000375274 VTCN1Q7Z7D3 282 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 CPA6Q8N4T0 437 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 MFSD2AQ8NA29 543 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 WFIKKN2Q8TEU8 576 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 CYB5D2Q8WUJ1 264 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 NDC1Q9BTX1 674 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 TRIM2Q9C040 744 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 SRMSQ9H3Y6 488 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 ADAMTS5Q9UNA0 930 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 GRIP1Q9Y3R0 1128 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 COCHO43405 550 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 B3GALT2O43825 422 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 RCBTB2O95199 551 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 MAT2AP31153 395 aaKnown RBP11.14□□□□□ -0.63
PTCH1-203ENST00000375274 HNF1BP35680 557 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 SLC3A1Q07837 685 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 TOMM20Q15388 145 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 SPHARQ15513 63 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 LIPKQ5VXJ0 399 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 MEDAGQ5VYS4 303 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 ASCC1Q8N9N2 400 aaKnown RBP11.14□□□□□ -0.63
PTCH1-203ENST00000375274 FRS2Q8WU20 508 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 EFHD2Q96C19 240 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-203ENST00000375274 SLC30A3Q99726 388 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 AGPAT4Q9NRZ5 378 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 MED11Q9P086 117 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 IL36AQ9UHA7 158 aa11.14□□□□□ -0.63
PTCH1-203ENST00000375274 KIAA0513O60268 411 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 MITFO75030 526 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 RFPL2O75678 378 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 ATF4P18848 351 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 ACVR2AP27037 513 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 RELAQ04206 551 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 SMCO1Q147U7 214 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 TRNP1Q6NT89 227 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 VITQ6UXI7 678 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 GALNT10Q86SR1 603 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 ATCAYQ86WG3 371 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 GPR135Q8IZ08 494 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 ACVR1CQ8NER5 493 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 KLK6Q92876 244 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 TRIB3Q96RU7 358 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 GPER1Q99527 375 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 NPLQ9BXD5 320 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 MKKSQ9NPJ1 570 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 PCDHGB5Q9Y5G0 923 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 CEPT1Q9Y6K0 416 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 COL2A1P02458 1487 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 A0A075B6Q4 140 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 PCP4L1A6NKN8 68 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 INMT-MINDY4F8WBC2 141 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 S100A6P06703 90 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 OPRL1P41146 370 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 DSG2Q14126 1118 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 RCAN2Q14206 197 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 EXOC3L2Q2M3D2 409 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 GTDC1Q4AE62 458 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 XKR4Q5GH76 650 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 TMEM53Q6P2H8 277 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 PLEKHG7Q6ZR37 379 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 LRRTM4Q86VH4 590 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 TMEM145Q8NBT3 493 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 OR8J1Q8NGP2 316 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 OR9A1PQ8NGU1 263 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 DPF3Q92784 378 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 UPB1Q9UBR1 384 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 HCN2Q9UL51 889 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 OR14I1A6ND48 311 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 PLOD2O00469 737 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 AGR2O95994 175 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF3P17036 446 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 TIA1P31483 386 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 ARCN1P48444 511 aaKnown RBP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 FAM189BP81408 668 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 GK3PQ14409 553 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 MINDY4Q4G0A6 757 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 HSDL2Q6YN16 418 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 PRSS48Q7RTY5 328 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 KCT2Q8NC54 265 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 CD99L2Q8TCZ2 262 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 BCL2L14Q9BZR8 327 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 RETREG1Q9H6L5 497 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 NUMA1Q14980 2115 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 NUP98P52948 1817 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 CA12O43570 354 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 RETP07949 1114 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 HSD3B1P14060 373 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 ACRV1P26436 265 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 HSD3B2P26439 372 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms