RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ATG10Q9H0Y0 220 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 RDH14Q9HBH5 336 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 DYRK4Q9NR20 520 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 PLSCR3Q9NRY6 295 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 PAQR5Q9NXK6 330 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CRNNQ9UBG3 495 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 ADAMDEC1O15204 470 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 KLKB1P03952 638 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 HIST1H2AGP0C0S8 130 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-203ENST00000374877 HIST1H2ADP20671 130 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 MZF1P28698 734 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ABRQ12979 859 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 MTAPQ13126 283 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ZMAT1Q5H9K5 638 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 LRRC66Q68CR7 880 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 SYNPOQ8N3V7 929 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 HIST1H2AHQ96KK5 128 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 MTERF1Q99551 399 aaKnown RBP10.66□□□□□ -0.7
CCDC40-203ENST00000374877 HIST1H2AJQ99878 128 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 H2AFJQ9BTM1 129 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 DOHHQ9BU89 302 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ZNF556Q9HAH1 456 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 SMURF1Q9HCE7 757 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 FKBP14Q9NWM8 211 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 NPAP1Q9NZP6 1156 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 TRPM5Q9NZQ8 1165 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 NDUFAF4Q9P032 175 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 LHX3Q9UBR4 397 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 PCDHB11Q9Y5F2 797 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 KLK4Q9Y5K2 254 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 CHD5Q8TDI0 1954 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ZNF840PA6NDX5 716 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 CENPBD1B2RD01 187 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 H3BM21 787 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 TGM5O43548 720 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ARHGEF15O94989 841 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 TIE1P35590 1138 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 CAMK2BQ13554 666 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 VEZF1Q14119 521 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 CDK10Q15131 360 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 EXOC3L2Q2M3D2 409 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ZXDCQ2QGD7 858 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-203ENST00000374877 MLIPQ5VWP3 458 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 MSANTD1Q6ZTZ1 278 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ZNF367Q7RTV3 350 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 CRELD1Q96HD1 420 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ST6GAL2Q96JF0 529 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 POFUT2Q9Y2G5 429 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 PCDHGA2Q9Y5H1 932 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 K7ERQ8 282 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 CCRL2O00421 344 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ARHGAP33O14559 1287 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 CAPN5O15484 640 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-203ENST00000374877 TPD52L2O43399 206 aaKnown RBP10.66□□□□□ -0.7
CCDC40-203ENST00000374877 SCN2BO60939 215 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 TRBC1P01850 177 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ACPPP15309 386 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 POU1F1P28069 291 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 HNF4AP41235 474 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 ERVK-21P61565 698 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 CHIT1Q13231 466 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 SNAP47Q5SQN1 464 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 C9orf50Q5SZB4 431 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 VANGL1Q8TAA9 524 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-203ENST00000374877 GPR151Q8TDV0 419 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 POF1BQ8WVV4 589 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 DUSP26Q9BV47 211 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 TIGARQ9NQ88 270 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 FAM120CQ9NX05 1096 aaKnown RBP10.66□□□□□ -0.7
CCDC40-203ENST00000374877 MUTYHQ9UIF7 546 aa10.66□□□□□ -0.7
CCDC40-203ENST00000374877 KCNE1BA0A087WTH5 132 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 SEMA3DO95025 777 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 ANXA8P13928 327 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 BPIP17213 487 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 ETV6P41212 452 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 CRATP43155 626 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 ERVFC1P60507 584 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 GPR50Q13585 617 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 TAF12Q16514 161 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 HECTD3Q5T447 861 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 CXorf57Q6NSI4 855 aaKnown RBP10.65□□□□□ -0.7
CCDC40-203ENST00000374877 LRRC70Q7Z2Q7 622 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 FAM217AQ8IXS0 508 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 NAGSQ8N159 534 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 DENND6BQ8NEG7 585 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 ASPNQ9BXN1 380 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 BEX2Q9BXY8 128 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 MMP28Q9H239 520 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 KCTD5Q9NXV2 234 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 PADI2Q9Y2J8 665 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 KLHL20Q9Y2M5 609 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 CFAP20Q9Y6A4 193 aaKnown RBP10.65□□□□□ -0.7
CCDC40-203ENST00000374877 E9PQ18 207 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 SCO2O43819 266 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 PCDH7O60245 1069 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 FZD6O60353 706 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 PRAMEF4O60810 478 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 GPX5O75715 221 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 HLA-EP13747 358 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 ACSM2AQ08AH3 577 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms