RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 RUNX3Q13761 415 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ELAVL3Q14576 367 aaKnown RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 HNRNPA1L2Q32P51 320 aaKnown RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ZNF385BQ569K4 471 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 PRAMEF13Q5VWM6 474 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 PROSER1Q86XN7 944 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 CHERPQ8IWX8 916 aaKnown RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 GOLM1Q8NBJ4 401 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 KAT2AQ92830 837 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 HEBP1Q9NRV9 189 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 STOML2Q9UJZ1 356 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 YBX2Q9Y2T7 364 aaKnown RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 A0A1W2PQU0 124 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 H3BNH8 94 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ANKRD28O15084 1053 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 SUV39H1O43463 412 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 DENRO43583 198 aaKnown RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 TSPAN9O75954 239 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 C1orf105O95561 183 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 BCHEP06276 602 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 NPPBP16860 134 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 TCEA1P23193 301 aaKnown RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 MAPK1P28482 360 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 RCVRNP35243 200 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 CREMQ03060 361 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 WSCD2Q2TBF2 565 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 CYBRD1Q53TN4 286 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 PERM1Q5SV97 790 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 DEPDC1Q5TB30 811 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 P3H2Q8IVL5 708 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ZNF547Q8IVP9 402 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ADHFE1Q8IWW8 467 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 TRAM1L1Q8N609 369 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ZNF548Q8NEK5 533 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 OR9Q2Q8NGE9 314 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 COX4I2Q96KJ9 171 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 MIR1-1HGQ9H1L0 117 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 KAT8Q9H7Z6 458 aaKnown RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 EXOSC4Q9NPD3 245 aaKnown RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 KRT84Q9NSB2 600 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 STARD5Q9NSY2 213 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 STON1Q9Y6Q2 735 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ABCA7Q8IZY2 2146 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 PATJQ8NI35 1801 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 A0A087WXM4 84 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 A0A1W2PS29 197 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 PIPSLA2A3N6 862 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 C1QTNF3-AMACRE9PGA6 284 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 KLK8O60259 260 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 PRKNO60260 465 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 FAM20BO75063 409 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 EFCAB14O75071 495 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ADAM23O75077 832 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 PEX14O75381 377 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 CDC123O75794 336 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 CYP7B1O75881 506 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 TYRP1P17643 537 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 CDH3P22223 829 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 RPS3P23396 243 aaKnown RBP eCLIP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ATP4BP51164 291 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 CLDN8P56748 225 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 TAP2Q03519 686 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 VASH1Q7L8A9 365 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 PARGQ86W56 976 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 CCDC116Q8IYX3 515 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 SHISA5Q8N114 240 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 OR9A1PQ8NGU1 263 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 C12orf43Q96C57 262 aaKnown RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ECHDC3Q96DC8 303 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 DTD2Q96FN9 168 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 PPP1R16AQ96I34 528 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 NTMT1Q9BV86 223 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 CLMPQ9H6B4 373 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 WDR26Q9H7D7 661 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 ABCD2Q9UBJ2 740 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 GULP1Q9UBP9 304 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 A0A1W2PRB8 838 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 FCGR1AP12314 374 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 PRPS1L1P21108 318 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 MLLT10P55197 1068 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 SRSF5Q13243 272 aaKnown RBP10.36□□□□□ -0.75
CXCL12-203ENST00000374429 SLC5A12Q1EHB4 618 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 LEXMQ3ZCV2 418 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 LRRC70Q7Z2Q7 622 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 OR8K5Q8NH50 307 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 MCCC1Q96RQ3 725 aaPredicted RBP10.36□□□□□ -0.75
CXCL12-203ENST00000374429 CPEB1Q9BZB8 566 aaKnown RBP10.36□□□□□ -0.75
CXCL12-203ENST00000374429 EHD1Q9H4M9 534 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 NTN4Q9HB63 628 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 PRSS16Q9NQE7 514 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 TRPS1Q9UHF7 1281 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 WDFY3Q8IZQ1 3526 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 UNC13CQ8NB66 2214 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 TRBV5-4A0A0C4DH59 114 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 POM121BA6NF01 834 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 OR2W5A6NFC9 320 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 EPOPA6NHQ4 379 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 BCKDKO14874 412 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 INMTO95050 263 aa10.36□□□□□ -0.75
CXCL12-203ENST00000374429 ACADMP11310 421 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms