RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 RGNQ15493 299 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 ADNP2Q6IQ32 1131 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 TTC23LQ6PF05 361 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 GPR155Q7Z3F1 870 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 FAM9CQ8IZT9 166 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 APCDD1Q8J025 514 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 DEPDC4Q8N2C3 294 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 FLCNQ8NFG4 579 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 PIH1D2Q8WWB5 315 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 TRMT61AQ96FX7 289 aaKnown RBP14.23□□□□□ -0.13
COL9A2-202ENST00000372748 CRELD1Q96HD1 420 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 NECTIN4Q96NY8 510 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 TCF25Q9BQ70 676 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 FAM8A1Q9UBU6 413 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 MBD1Q9UIS9 605 aaPredicted RBP14.23□□□□□ -0.13
COL9A2-202ENST00000372748 POFUT2Q9Y2G5 429 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 GRIP1Q9Y3R0 1128 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 GLYATL1P3A0A0U1RQE8 302 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 SMIM30A4D0T7 59 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 FAM227AF5H4B4 570 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CHRM5P08912 532 aaPredicted RBP14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CYP2A7P20853 494 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CD72P21854 359 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 TUFMP49411 452 aaKnown RBP14.22□□□□□ -0.13
COL9A2-202ENST00000372748 SMAD3P84022 425 aaKnown RBP14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CHIT1Q13231 466 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 TIMM50Q3ZCQ8 353 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 COX20Q5RI15 118 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 KIAA1841Q6NSI8 718 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 ZNF852Q6ZMS4 543 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CSGALNACT1Q8TDX6 532 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 DUSP26Q9BV47 211 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 KLF16Q9BXK1 252 aaPredicted RBP14.22□□□□□ -0.13
COL9A2-202ENST00000372748 IRF2BPLQ9H1B7 796 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 RDH14Q9HBH5 336 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 RPRD1BQ9NQG5 326 aaKnown RBP14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CLEC2DQ9UHP7 191 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 PCDHGB2Q9Y5G2 931 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 UGT2B17O75795 530 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CCR7P32248 378 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 SELENOWP63302 87 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CHRNEQ04844 493 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CDH18Q13634 790 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 MICAQ29983 383 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 PTCHD4Q6ZW05 846 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 SLC44A2Q8IWA5 706 aaPredicted RBP14.22□□□□□ -0.13
COL9A2-202ENST00000372748 OPALINQ96PE5 141 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CITED4Q96RK1 184 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 CWH43Q9H720 699 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 ZNF556Q9HAH1 456 aa14.22□□□□□ -0.13
COL9A2-202ENST00000372748 ERVH48-1M5A8F1 160 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 ETFAP13804 333 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 ANXA8P13928 327 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 SELPP16109 830 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 ITGA2P17301 1181 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 AOAHP28039 575 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 FEN1P39748 380 aaKnown RBP14.21□□□□□ -0.13
COL9A2-202ENST00000372748 ELAVL2Q12926 359 aaKnown RBP14.21□□□□□ -0.13
COL9A2-202ENST00000372748 ABRQ12979 859 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 EIF4HQ15056 248 aaKnown RBP14.21□□□□□ -0.13
COL9A2-202ENST00000372748 HKDC1Q2TB90 917 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 TSPAN33Q86UF1 283 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 NOXA1Q86UR1 476 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 SIMC1Q8NDZ2 872 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 CLIP3Q96DZ5 547 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 RNF170Q96K19 258 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 FAM129BQ96TA1 746 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 HHATLQ9HCP6 504 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 TRAPPC4Q9Y296 219 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 HMX3A6NHT5 357 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 GABRR3A8MPY1 467 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 CPNE3O75131 537 aaKnown RBP14.21□□□□□ -0.13
COL9A2-202ENST00000372748 SSTR4P31391 388 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 HNF1BP35680 557 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 GNG2P59768 71 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 RFPL4BQ6ZWI9 263 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 NLRP8Q86W28 1048 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 VRK3Q8IV63 474 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 OR4C15Q8NGM1 316 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 C2orf15Q8WU43 125 aaKnown RBP14.21□□□□□ -0.13
COL9A2-202ENST00000372748 CHST8Q9H2A9 424 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 GIMAP4Q9NUV9 329 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 SH3BP4Q9P0V3 963 aa14.21□□□□□ -0.13
COL9A2-202ENST00000372748 A0A075B6Q4 140 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 CCNB2O95067 398 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 CNR2P34972 360 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 CDC42P60953 191 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 GPLD1P80108 840 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 BOP1Q14137 746 aaKnown RBP14.2□□□□□ -0.14
COL9A2-202ENST00000372748 LEXMQ3ZCV2 418 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 DGKKQ5KSL6 1271 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 C19orf48Q6RUI8 117 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 FAM131AQ6UXB0 335 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 PAMR1Q6UXH9 720 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 MACC1Q6ZN28 852 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 VN1R5Q7Z5H4 357 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 NPAS4Q8IUM7 802 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 SLC34A3Q8N130 599 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 C11orf65Q8NCR3 313 aa14.2□□□□□ -0.14
COL9A2-202ENST00000372748 OR8J2Q8NGG1 315 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms