RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 PRKCGP05129 697 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 TCEA1P23193 301 aaKnown RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 MAP3K8P41279 467 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 MRPS10P82664 201 aaKnown RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 SYT16Q17RD7 645 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ZNF776Q68DI1 518 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 REP15Q6BDI9 236 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 SETD7Q8WTS6 366 aaKnown RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 LCN9Q8WX39 176 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 SMARCD2Q92925 531 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ZNF347Q96SE7 839 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 GBA3Q9H227 469 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ALG2Q9H553 416 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 TPT1P8Q9HAU6 139 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 SSU72Q9NP77 194 aaKnown RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 MGAT4BQ9UQ53 548 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 LRRC42Q9Y546 428 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 PCDHGB5Q9Y5G0 923 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 WASF2Q9Y6W5 498 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 CPED1A4D0V7 1026 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 MAGEB4O15481 346 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 FAM163BP0C2L3 166 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 GPR157Q5UAW9 335 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 CORO6Q6QEF8 472 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ADGRD1Q6QNK2 874 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 PNLDC1Q8NA58 520 aaKnown RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 CLEC4CQ8WTT0 213 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 TLCD1Q96CP7 247 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 S100A16Q96FQ6 103 aaKnown RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 WDR55Q9H6Y2 383 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 NANSQ9NR45 359 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 DNAJB9Q9UBS3 223 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 CD300AQ9UGN4 299 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 HEBP2Q9Y5Z4 205 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 MTMR11A4FU01 709 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 A8MXE2 369 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 PAHP00439 452 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 CCR10P46092 362 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 POLR2JP52435 117 aaKnown RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 SRSF11Q05519 484 aaKnown RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 GCNT6Q5T4J0 391 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 HGSNATQ68CP4 663 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ENPP7Q6UWV6 458 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 CHSY3Q70JA7 882 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 STYXQ8WUJ0 223 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ROPN1LQ96C74 230 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 PPCDCQ96CD2 204 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 OTUB2Q96DC9 234 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 TRMOQ9BU70 441 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 INMTO95050 263 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 AMZ1Q400G9 498 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 COX15Q7KZN9 410 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 SPARTQ8N0X7 666 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 DEFB119Q8N690 84 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 PSD4Q8NDX1 1056 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 BEX2Q9BXY8 128 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 SLC5A7Q9GZV3 580 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 MOCS1Q9NZB8 636 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 COL2A1P02458 1487 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 AGPSO00116 658 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 ARL6IP5O75915 188 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 CDRT1O95170 752 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 CDK1P06493 297 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 ADGRG6Q86SQ4 1221 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 MYLIPQ8WY64 445 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 VRK1Q99986 396 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 NSUN3Q9H649 340 aaKnown RBP13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 FBXO5Q9UKT4 447 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 FAM155BO75949 473 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 CHRM5P08912 532 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 TPSB2P20231 275 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 GJA5P36382 358 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 TAGLNQ01995 201 aaKnown RBP13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 TPSAB1Q15661 275 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 SLC9B1Q4ZJI4 515 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 LRRC73Q5JTD7 316 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 OR5T1Q8NG75 326 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 STON2Q8WXE9 905 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 NECTIN4Q96NY8 510 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 SMG9Q9H0W8 520 aaKnown RBP13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 SLC25A51Q9H1U9 297 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 SCML2Q9UQR0 700 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 ALS2Q96Q42 1657 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 LEFTY2O00292 366 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 CTHP32929 405 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 ANKRD54Q6NXT1 300 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 FAM111BQ6SJ93 734 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 TMEM209Q96SK2 561 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 CCDC32Q9BV29 185 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 CADM1Q9BY67 442 aaKnown RBP13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 FBRSQ9HAH7 460 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 BEX1Q9HBH7 125 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 GPATCH2Q9NW75 528 aa13.61□□□□□ -0.23
RAPGEF1-202ENST00000372190 NUPL2O15504 423 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-202ENST00000372190 CREBL2O60519 120 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF1-202ENST00000372190 TNFP01375 233 aa13.6□□□□□ -0.23
RAPGEF1-202ENST00000372190 HNRNPA1P09651 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
RAPGEF1-202ENST00000372190 TACSTD2P09758 323 aa13.6□□□□□ -0.23
RAPGEF1-202ENST00000372190 H2AFB2P0C5Z0 115 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms