RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 NDUFS4O43181 175 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 KLK3P07288 261 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 NAT2P11245 290 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 RGS8P57771 180 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ATG9BQ674R7 924 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 GPRIN1Q7Z2K8 1008 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 COX18Q8N8Q8 333 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 STON2Q8WXE9 905 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 TRNT1Q96Q11 434 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 PKP2Q99959 881 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 MGME1Q9BQP7 344 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF700Q9H0M5 742 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 TBC1D17Q9HA65 648 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF282Q9UDV7 671 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 TAC3Q9UHF0 121 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 FAM159BA6NKW6 160 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF705FA8MVS1 300 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 AKAP8O43823 692 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF705DP0CH99 300 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF705BP0CI00 300 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 GRIA1P42261 906 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 DPY19L1Q2PZI1 675 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 HCAR2Q8TDS4 363 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC35G5Q96KT7 338 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 HBEGFQ99075 208 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 TMEM9Q9P0T7 183 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 EIF3KQ9UBQ5 218 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 CLCA3PQ9Y6N3 262 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 XKRYO14609 159 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 STC2O76061 302 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 GIMD1P0DJR0 217 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 FXNQ16595 210 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 TMEM126BQ8IUX1 230 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 UBE2J2Q8N2K1 259 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 CANT1Q8WVQ1 401 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 DDX1Q92499 740 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ITPAQ9BY32 194 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC2A6Q9UGQ3 507 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 PIAS3Q9Y6X2 628 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 A0A1W2PP55 124 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 TCRBV7S3A2A0A539 114 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 PTGESO14684 152 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 PDCD5O14737 125 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 TSPAN6O43657 245 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 POU2F1P14859 743 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 CST5P28325 142 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 NCBP2P52298 156 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF829Q3KNS6 432 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 FBXO43Q4G163 708 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 GPR153Q6NV75 609 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZMIZ2Q8NF64 920 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR5T1Q8NG75 326 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 PEBP4Q96S96 227 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 BHLHE41Q9C0J9 482 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 DLGAP4Q9Y2H0 992 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 PAPSS2O95340 614 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 PLATP00750 562 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 MPIP34949 423 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF311Q5JNZ3 666 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR7G2Q8NG99 324 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 C3orf49Q96BT1 292 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 DGAT2Q96PD7 388 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 ADAM7Q9H2U9 754 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 NLE1Q9NVX2 485 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 PCDH7O60245 1069 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 RNGTTO60942 597 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 ATP5A1P25705 553 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC6A4P31645 630 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 DCDC1P59894 354 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 KCNJ11Q14654 390 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 IDNKQ5T6J7 187 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 PAPD4Q6PIY7 484 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 LRRC15Q8TF66 581 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 RNF31Q96EP0 1072 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 GPR174Q9BXC1 333 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 STRADBQ9C0K7 418 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 MCOLN1Q9GZU1 580 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR10A4Q9H209 315 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 DCSTAMPQ9H295 470 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 VIPR2P41587 438 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 STK19P49842 368 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 CDH15P55291 814 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 GPRC6AQ5T6X5 926 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 RANBP3LQ86VV4 465 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 POC1BQ8TC44 478 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 PYCR2Q96C36 320 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC32A1Q9H598 525 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZDHHC7Q9NXF8 308 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF69Q9UC07 566 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 PCDHGA6Q9Y5G7 932 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 TTLL8A6PVC2 850 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 C12orf71A8MTZ7 269 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 ECI2O75521 394 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZDHHC11BP0C7U3 371 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 PROZP22891 400 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC18A2Q05940 514 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 CAMK1Q14012 370 aa12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 EIF4HQ15056 248 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-201ENST00000372189 TMEM198Q66K66 360 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms