RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 AGRPO00253 132 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 QSOX1O00391 747 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 MAPK12P53778 367 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 MANFP55145 182 aaKnown RBP11.26□□□□□ -0.61
PDE6C-201ENST00000371447 SPATS1Q496A3 300 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 PAGE2BQ5JRK9 111 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TMEM236Q5W0B7 351 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 MEX3DQ86XN8 651 aaKnown RBP11.26□□□□□ -0.61
PDE6C-201ENST00000371447 FAM9CQ8IZT9 166 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 CACTIN-AS1Q8N1I8 211 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 DRAXINQ8NBI3 349 aaPredicted RBP11.26□□□□□ -0.61
PDE6C-201ENST00000371447 EZH1Q92800 747 aaPredicted RBP11.26□□□□□ -0.61
PDE6C-201ENST00000371447 RAD51AP1Q96B01 352 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 C17orf62Q9BQA9 187 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 REEP4Q9H6H4 257 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 PAK1IP1Q9NWT1 392 aaPredicted RBP11.26□□□□□ -0.61
PDE6C-201ENST00000371447 FAM120CQ9NX05 1096 aaKnown RBP11.26□□□□□ -0.61
PDE6C-201ENST00000371447 ADPRHL2Q9NX46 363 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 KLHL42Q9P2K6 505 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TRPC4Q9UBN4 977 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TMEFF2Q9UIK5 374 aaPredicted RBP11.26□□□□□ -0.61
PDE6C-201ENST00000371447 MAN2B2Q9Y2E5 1009 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 MYO10Q9HD67 2058 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 EIF3FO00303 357 aaPredicted RBP11.25□□□□□ -0.61
PDE6C-201ENST00000371447 PFDN1O60925 122 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 FAM20BO75063 409 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 TGFBR1P36897 503 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 TRPC1P48995 793 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 HLCSP50747 726 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 CLDN2P57739 230 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 TUBA4AP68366 448 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 RUNX3Q13761 415 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 ZNF750Q32MQ0 723 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 KIAA1211LQ6NV74 962 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SPARTQ8N0X7 666 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 C11orf65Q8NCR3 313 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 OR9Q2Q8NGE9 314 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 CHTF18Q8WVB6 975 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 NODALQ96S42 347 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 EPB41L1Q9H4G0 881 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 IL1RAPQ9NPH3 570 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SELENONQ9NZV5 590 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 DKK3Q9UBP4 350 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 RPS6KA6Q9UK32 745 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 STON1Q9Y6Q2 735 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SCN3AQ9NY46 2000 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 CCDC88CQ9P219 2028 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 GRXCR2A6NFK2 248 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 RNF144AP50876 292 aaPredicted RBP11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SGCGQ13326 291 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 MPEG1Q2M385 716 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 CDKL4Q5MAI5 379 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 ZNF773Q6PK81 442 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 PARM1Q6UWI2 310 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 USP51Q70EK9 711 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 HIPK1Q86Z02 1210 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SNX29P2Q8IUI4 249 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 FCRL4Q96PJ5 515 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 FEVQ99581 238 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 GPATCH2Q9NW75 528 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 MARK1Q9P0L2 795 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 RABL2BQ9UNT1 228 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 OBSL1O75147 1896 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SYNDIG1LA6NDD5 238 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SLC1A7O00341 560 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 ATP6V1G1O75348 118 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 GPC1P35052 558 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 ASMTP46597 345 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 PPM1FP49593 454 aaPredicted RBP11.25□□□□□ -0.61
PDE6C-201ENST00000371447 CDK3Q00526 305 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SCARB2Q14108 478 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SHHQ15465 462 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 FXNQ16595 210 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SYT16Q17RD7 645 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 SPIN4Q56A73 249 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 PNCKQ6P2M8 343 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 ERI1Q8IV48 349 aaKnown RBP11.25□□□□□ -0.61
PDE6C-201ENST00000371447 WFIKKN2Q8TEU8 576 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 FGF14Q92915 247 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 LRIG1Q96JA1 1093 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 VPS35Q96QK1 796 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 CD93Q9NPY3 652 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 RAD18Q9NS91 495 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 ASIC5Q9NY37 505 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 ZNF639Q9UID6 485 aa11.25□□□□□ -0.61
PDE6C-201ENST00000371447 YBX2Q9Y2T7 364 aaKnown RBP11.25□□□□□ -0.61
PDE6C-201ENST00000371447 H0YAE9 185 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 TNFRSF11BO00300 401 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 LILRB5O75023 590 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 FUCA1P04066 466 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 HSMCR30P0CW71 290 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 GPX2P18283 190 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 RAB8AP61006 207 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 CDK5R2Q13319 367 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 CYP2A13Q16696 494 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 LAIR1Q6GTX8 287 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 METTL2BQ6P1Q9 378 aaKnown RBP11.24□□□□□ -0.61
PDE6C-201ENST00000371447 KLHL17Q6TDP4 642 aa11.24□□□□□ -0.61
PDE6C-201ENST00000371447 WDR53Q7Z5U6 358 aaPredicted RBP11.24□□□□□ -0.61
PDE6C-201ENST00000371447 SERPINA11Q86U17 422 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms