RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 MIEF2Q96C03 454 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 MOCOSQ96EN8 888 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 CDK15Q96Q40 435 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 MTERF1Q99551 399 aaKnown RBP13.06□□□□□ -0.32
SSR4-202ENST00000370085 SERPINI1Q99574 410 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 C12orf65Q9H3J6 166 aaKnown RBP13.06□□□□□ -0.32
SSR4-202ENST00000370085 SYNPO2LQ9H987 977 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 AKIRIN1Q9H9L7 192 aaPredicted RBP13.06□□□□□ -0.32
SSR4-202ENST00000370085 PSD3Q9NYI0 1048 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 NKIRAS1Q9NYS0 192 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 IL17BQ9UHF5 180 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 PPT2Q9UMR5 302 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 PTRH2Q9Y3E5 179 aaKnown RBP13.06□□□□□ -0.32
SSR4-202ENST00000370085 SCN3AQ9NY46 2000 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 UQCRHLA0A096LP55 91 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 SGK494L7N484 410 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 PSMD12O00232 456 aaPredicted RBP13.05□□□□□ -0.32
SSR4-202ENST00000370085 TERTO14746 1132 aaKnown RBP13.05□□□□□ -0.32
SSR4-202ENST00000370085 PCDH17O14917 1159 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 BIRC5O15392 142 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 FOXS1O43638 330 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 B3GALT2O43825 422 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 GALR3O60755 368 aaPredicted RBP13.05□□□□□ -0.32
SSR4-202ENST00000370085 ESRRBO95718 433 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 TGFB1P01137 390 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 UQCRHP07919 91 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 TSPAN8P19075 237 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 ALDH3A1P30838 453 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 TSFMP43897 325 aaKnown RBP13.05□□□□□ -0.32
SSR4-202ENST00000370085 RAB8AP61006 207 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 MAGOHP61326 146 aaKnown RBP13.05□□□□□ -0.32
SSR4-202ENST00000370085 SSPNQ14714 243 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 AP5B1Q2VPB7 878 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 ADPRMQ3LIE5 342 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 HHATQ5VTY9 493 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 KHDRBS2Q5VWX1 349 aaKnown RBP13.05□□□□□ -0.32
SSR4-202ENST00000370085 LCN10Q6JVE6 187 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 MRPL14Q6P1L8 145 aaKnown RBP13.05□□□□□ -0.32
SSR4-202ENST00000370085 ADAMTS18Q8TE60 1221 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 SELENOMQ8WWX9 145 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 THAP4Q8WY91 577 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 RGMAQ96B86 450 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 MS4A6EQ96DS6 147 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 TBCDQ9BTW9 1192 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 NPLQ9BXD5 320 aaPredicted RBP13.05□□□□□ -0.32
SSR4-202ENST00000370085 MS4A8Q9BY19 250 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 TGIF2Q9GZN2 237 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 GSTO2Q9H4Y5 243 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 CPNE5Q9HCH3 593 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 MID1IP1Q9NPA3 183 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 DMRT3Q9NQL9 472 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 AHSPQ9NZD4 102 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 SPACA6W5XKT8 324 aa13.05□□□□□ -0.32
SSR4-202ENST00000370085 ZZEF1O43149 2961 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 FFAR3O14843 346 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 GPR42O15529 346 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 NPHS1O60500 1241 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 ULK1O75385 1050 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 RDH16O75452 317 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 OR4F21O95013 312 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 SNUPNO95149 360 aaKnown RBP13.04□□□□□ -0.32
SSR4-202ENST00000370085 MED26O95402 600 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 CHEK2O96017 543 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 CAPN1P07384 714 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 BPGMP07738 259 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 CYC1P08574 325 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 ZGLP1P0C6A0 271 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 RNH1P13489 461 aaKnown RBP13.04□□□□□ -0.32
SSR4-202ENST00000370085 HSD3B1P14060 373 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 CREB1P16220 341 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 JAK1P23458 1154 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 F8A1P23610 371 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 HSD3B2P26439 372 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 HNRNPH1P31943 449 aaKnown RBP13.04□□□□□ -0.32
SSR4-202ENST00000370085 SSR2P43308 183 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 SERPINB4P48594 390 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 PLA2G16P53816 162 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 SLC18A1P54219 525 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 MTTPP55157 894 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 BTN3A2P78410 334 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 CDC20Q12834 499 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 HYAL2Q12891 473 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 CUL3Q13618 768 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 ERV3-1Q14264 604 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 NKG7Q16617 165 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 UGT8Q16880 541 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 DEPDC1Q5TB30 811 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 MFSD4BQ5TF39 518 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 LETMD1Q6P1Q0 360 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 RPS27LQ71UM5 84 aaKnown RBP13.04□□□□□ -0.32
SSR4-202ENST00000370085 GPR155Q7Z3F1 870 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 KIRREL3Q8IZU9 778 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 CDYL2Q8N8U2 506 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 OR51Q1Q8NH59 317 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 WDR20Q8TBZ3 569 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 STT3BQ8TCJ2 826 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 SNRNP27Q8WVK2 155 aaKnown RBP13.04□□□□□ -0.32
SSR4-202ENST00000370085 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.04□□□□□ -0.32
SSR4-202ENST00000370085 OR1F2PQ96R84 312 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 SERINC2Q96SA4 455 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms