RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SYT16Q17RD7 645 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 NKAIN1Q4KMZ8 207 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 DEPDC1Q5TB30 811 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 KHDRBS2Q5VWX1 349 aaKnown RBP13.19□□□□□ -0.3
TPM3-211ENST00000368531 ZNF385CQ66K41 422 aaPredicted RBP13.19□□□□□ -0.3
TPM3-211ENST00000368531 ATG16L1Q676U5 607 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 TRIM40Q6P9F5 258 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 VASH2Q86V25 355 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 PDSS2Q86YH6 399 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 SHISA5Q8N114 240 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 OR2L5Q8NG80 312 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 PROKR1Q8TCW9 393 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 CT55Q8WUE5 264 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 KCNE4Q8WWG9 221 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 ZNF75CPQ92670 426 aaPredicted RBP13.19□□□□□ -0.3
TPM3-211ENST00000368531 GAL3ST3Q96A11 431 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 FAR2Q96K12 515 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 LRFN5Q96NI6 719 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 C17orf62Q9BQA9 187 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 SORBS1Q9BX66 1292 aaKnown RBP13.19□□□□□ -0.3
TPM3-211ENST00000368531 HCN3Q9P1Z3 774 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 IFT80Q9P2H3 777 aaPredicted RBP13.19□□□□□ -0.3
TPM3-211ENST00000368531 GPN3Q9UHW5 284 aaPredicted RBP13.19□□□□□ -0.3
TPM3-211ENST00000368531 ACSL6Q9UKU0 697 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 CDC14AQ9UNH5 594 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 SLC12A4Q9UP95 1085 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 TSC22D4Q9Y3Q8 395 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 PTGDR2Q9Y5Y4 395 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 SLC22A7Q9Y694 548 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 LOC101059948A0A1B0GTJ6 334 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.18□□□□□ -0.3
TPM3-211ENST00000368531 FOXE1O00358 373 aaPredicted RBP13.18□□□□□ -0.3
TPM3-211ENST00000368531 KLK10O43240 276 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 GALR3O60755 368 aaPredicted RBP13.18□□□□□ -0.3
TPM3-211ENST00000368531 RDH16O75452 317 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 SMIM10L1P0DMW3 83 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 DLSTP36957 453 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 BTKQ06187 659 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 TGM3Q08188 693 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 GALNT1Q10472 559 aaPredicted RBP13.18□□□□□ -0.3
TPM3-211ENST00000368531 SRSF6Q13247 344 aaKnown RBP13.18□□□□□ -0.3
TPM3-211ENST00000368531 MAP7Q14244 749 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 HERC3Q15034 1050 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 PRMT9Q6P2P2 845 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 UBE3DQ7Z6J8 389 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 DTX1Q86Y01 620 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 DDIASQ8IXT1 998 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 CLYBLQ8N0X4 340 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 ZNF781Q8N8C0 355 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 AMER3Q8N944 861 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 ZNF248Q8NDW4 579 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 OR5T3Q8NGG3 340 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 LRRC8CQ8TDW0 803 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 ZCCHC14Q8WYQ9 949 aaKnown RBP13.18□□□□□ -0.3
TPM3-211ENST00000368531 RGMAQ96B86 450 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 SMIM10Q96HG1 83 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 SORT1Q99523 831 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 SERPINI1Q99574 410 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 CENPKQ9BS16 269 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 ILKAPQ9H0C8 392 aaPredicted RBP13.18□□□□□ -0.3
TPM3-211ENST00000368531 COPS7BQ9H9Q2 264 aaPredicted RBP13.18□□□□□ -0.3
TPM3-211ENST00000368531 ENAMQ9NRM1 1142 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 SLC22A11Q9NSA0 550 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 PNPOQ9NVS9 261 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 TRPC4Q9UBN4 977 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 CROTQ9UKG9 612 aa13.18□□□□□ -0.3
TPM3-211ENST00000368531 C9J4A7 227 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 SKAP2O75563 359 aaPredicted RBP13.17□□□□□ -0.3
TPM3-211ENST00000368531 NSA2O95478 260 aaKnown RBP13.17□□□□□ -0.3
TPM3-211ENST00000368531 CHEK2O96017 543 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 FGF4P08620 206 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 LINC00032P0C843 101 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 PIM1P11309 404 aaPredicted RBP13.17□□□□□ -0.3
TPM3-211ENST00000368531 STAT5AP42229 794 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 SSR2P43308 183 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 FOXL2P58012 376 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 HMGCS1Q01581 520 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 CLN3Q13286 438 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 IMPG1Q17R60 797 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 AP5B1Q2VPB7 878 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 ADPRMQ3LIE5 342 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 TMEM35AQ53FP2 167 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 SPDYAQ5MJ70 313 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 FAM69BQ5VUD6 431 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 KANK2Q63ZY3 851 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 ABHD17CQ6PCB6 329 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 FAM198BQ6UWH4 519 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 SHISA6Q6ZSJ9 500 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 COX15Q7KZN9 410 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 PRSS58Q8IYP2 241 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 AFAP1L2Q8N4X5 818 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 ARFGAP2Q8N6H7 521 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 SRFBP1Q8NEF9 429 aaKnown RBP13.17□□□□□ -0.3
TPM3-211ENST00000368531 SNIP1Q8TAD8 396 aaKnown RBP13.17□□□□□ -0.3
TPM3-211ENST00000368531 TWIST2Q8WVJ9 160 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 MVB12AQ96EY5 273 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 PPP1R36Q96LQ0 422 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 MRPL1Q9BYD6 325 aaKnown RBP13.17□□□□□ -0.3
TPM3-211ENST00000368531 ACPTQ9BZG2 426 aa13.17□□□□□ -0.3
TPM3-211ENST00000368531 GPN2Q9H9Y4 310 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms