RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 KAT8Q9H7Z6 458 aaKnown RBP12.45□□□□□ -0.42
PTPRK-207ENST00000368226 MAGEE1Q9HCI5 957 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 HCSTQ9UBK5 93 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 PLCL2Q9UPR0 1127 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 WDR45Q9Y484 360 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 A0A0X1KG70 313 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 PSKH1P11801 424 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 CD72P21854 359 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 GRB7Q14451 532 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 TSTQ16762 297 aaKnown RBP12.45□□□□□ -0.42
PTPRK-207ENST00000368226 SCGB2B2Q4G0G5 96 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 COLEC12Q5KU26 742 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 NPWQ8N729 165 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 ANKFN1Q8N957 763 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 OR56A1Q8NGH5 318 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 BORCS6Q96GS4 357 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF778Q96MU6 729 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 F2RL3Q96RI0 385 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 ZBTB26Q9HCK0 441 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 SHMT2P34897 504 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 SLAMF1Q13291 335 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 LRRTM3Q86VH5 581 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 FBXL20Q96IG2 436 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 BOCQ9BWV1 1114 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 UCK2Q9BZX2 261 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 THUMPD1Q9NXG2 353 aaKnown RBP12.44□□□□□ -0.42
PTPRK-207ENST00000368226 GPR89AB7ZAQ6 455 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 E7EQ34 232 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 GPR89BP0CG08 455 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 GMFBP60983 142 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 DEFB103AP81534 67 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF763Q0D2J5 394 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 UBQLNLQ8IYU4 475 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 KCNJ9Q92806 393 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 TSSK6Q9BXA6 273 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 SMURF2Q9HAU4 748 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 LYARQ9NX58 379 aaKnown RBP12.44□□□□□ -0.42
PTPRK-207ENST00000368226 NKX1-2Q9UD57 310 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-207ENST00000368226 PCDHB3Q9Y5E6 796 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 PHRF1Q9P1Y6 1649 aaKnown RBP12.44□□□□□ -0.42
PTPRK-207ENST00000368226 CLIC3O95833 236 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 CD1DP15813 335 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 BMPR1AP36894 532 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 NFE2L1Q14494 772 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 CYBRD1Q53TN4 286 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF572Q7Z3I7 529 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-207ENST00000368226 ASPGQ86U10 573 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 STX12Q86Y82 276 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 TRAM1L1Q8N609 369 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 STON2Q8WXE9 905 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 MSLNLQ96KJ4 702 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 CITED4Q96RK1 184 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 ASPNQ9BXN1 380 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 MRM3Q9HC36 420 aaKnown RBP12.44□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF878C9JN71 531 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 CAPN5O15484 640 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-207ENST00000368226 HCRTR2O43614 444 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 CST6Q15828 149 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 PLEKHS1Q5SXH7 462 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 FOXRED2Q8IWF2 684 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 DNAJB8Q8NHS0 232 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 TMED5Q9Y3A6 229 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 SPEF2Q9C093 1822 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 SOCS5O75159 536 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 ARSAP15289 507 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 FOSL2P15408 326 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 CD9P21926 228 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 OR3A3P47888 321 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 OR3A2P47893 321 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 SLC9A3P48764 834 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 RPS3AP61247 264 aaKnown RBP12.44□□□□□ -0.42
PTPRK-207ENST00000368226 DNASE1L3Q13609 305 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 C1orf220Q5T0J3 134 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF615Q8N8J6 731 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 OR4K14Q8NGD5 310 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 PCDHGB7Q9Y5F8 929 aa12.44□□□□□ -0.42
PTPRK-207ENST00000368226 A0A1W2PRQ8 180 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 MTRF1O75570 445 aaKnown RBP12.43□□□□□ -0.42
PTPRK-207ENST00000368226 AGR2O95994 175 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 FBLP22087 321 aaKnown RBP12.43□□□□□ -0.42
PTPRK-207ENST00000368226 GRIA2P42262 883 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 VBP1P61758 197 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 NIPAL4Q0D2K0 466 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 ABCA11PQ4W5N1 156 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 TAS1R1Q7RTX1 841 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 SEC14L1Q92503 715 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 ZDHHC12Q96GR4 267 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 UHRF1Q96T88 793 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-207ENST00000368226 EPYCQ99645 322 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 FAM83CQ9BQN1 747 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 SP140LQ9H930 580 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 PARPBPQ9NWS1 579 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 C19orf25Q9UFG5 118 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-207ENST00000368226 CFL2Q9Y281 166 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 LRP6O75581 1613 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 PDCD5O14737 125 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 LDOC1O95751 146 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-207ENST00000368226 SCGB1D2O95969 90 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 HCKP08631 526 aa12.43□□□□□ -0.42
PTPRK-207ENST00000368226 AOC1P19801 751 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms