RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 COL21A1Q96P44 957 aa13.72□□□□□ -0.21
CD48-201ENST00000368045 SLC35A5Q9BS91 424 aa13.72□□□□□ -0.21
CD48-201ENST00000368045 SGPP1Q9BX95 441 aa13.72□□□□□ -0.21
CD48-201ENST00000368045 ZCCHC2Q9C0B9 1178 aaKnown RBP13.72□□□□□ -0.21
CD48-201ENST00000368045 DCSTAMPQ9H295 470 aa13.72□□□□□ -0.21
CD48-201ENST00000368045 ZNF556Q9HAH1 456 aa13.72□□□□□ -0.21
CD48-201ENST00000368045 DMRT3Q9NQL9 472 aa13.72□□□□□ -0.21
CD48-201ENST00000368045 ITM2CQ9NQX7 267 aa13.72□□□□□ -0.21
CD48-201ENST00000368045 CCL26Q9Y258 94 aa13.72□□□□□ -0.21
CD48-201ENST00000368045 TSC22D4Q9Y3Q8 395 aa13.72□□□□□ -0.21
CD48-201ENST00000368045 TMEM247A6NEH6 219 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 ARRDC5A6NEK1 342 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 SAGE2PA6NJ88 616 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 H3BM21 787 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 AIREO43918 545 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 KRT75O95678 551 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 RB1P06400 928 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 FURINP09958 794 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 ELFN1P0C7U0 828 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 HLA-EP13747 358 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 ETFAP13804 333 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 PIK3CBP42338 1070 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 HMGA2P52926 109 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 ATN1P54259 1190 aaPredicted RBP13.71□□□□□ -0.21
CD48-201ENST00000368045 HBA1P69905 142 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 SPIBQ01892 262 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 TLE2Q04725 743 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 FAM71E1Q6IPT2 247 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 TMEM220Q6QAJ8 160 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 LIPIQ6XZB0 460 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 PLEKHG7Q6ZR37 379 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 PAGE2Q7Z2X7 111 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 SLC46A3Q7Z3Q1 461 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 ZNF605Q86T29 641 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 TRIM74Q86UV6 250 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 TRIM73Q86UV7 250 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 ARMC8Q8IUR7 673 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 LGI4Q8N135 537 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 KBTBD8Q8NFY9 601 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 C9orf43Q8TAL5 461 aaPredicted RBP13.71□□□□□ -0.21
CD48-201ENST00000368045 ZNF480Q8WV37 535 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 UBE2E3Q969T4 207 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 AP2M1Q96CW1 435 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 ALOXE3Q9BYJ1 711 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 PRM3Q9NNZ6 103 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 PAK6Q9NQU5 681 aaPredicted RBP13.71□□□□□ -0.21
CD48-201ENST00000368045 GPATCH2Q9NW75 528 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 CCDC59Q9P031 241 aaKnown RBP13.71□□□□□ -0.21
CD48-201ENST00000368045 MARK1Q9P0L2 795 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 FAM8A1Q9UBU6 413 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 RAPGEFL1Q9UHV5 662 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 OGDHLQ9ULD0 1010 aa13.71□□□□□ -0.21
CD48-201ENST00000368045 EFCAB14O75071 495 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 C6orf47O95873 294 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 VIPP01282 170 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 NPPBP16860 134 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 CA8P35219 290 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 PRIM2P49643 509 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 EPHA5P54756 1037 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 TBPL1P62380 186 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 OLR1P78380 273 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 CDK6Q00534 326 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 SLBPQ14493 270 aaKnown RBP eCLIP13.71□□□□□ -0.22
CD48-201ENST00000368045 TIGD6Q17RP2 521 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 ZNF404Q494X3 552 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 ARHGAP15Q53QZ3 475 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 COX20Q5RI15 118 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 ADNP2Q6IQ32 1131 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 SYTL1Q8IYJ3 562 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 METTL4Q8N3J2 472 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 AMER2Q8N7J2 671 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 C16orf78Q8WTQ4 265 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 GGHQ92820 318 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 RPL3LQ92901 407 aaKnown RBP13.71□□□□□ -0.22
CD48-201ENST00000368045 OTUB2Q96DC9 234 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 PPP1R16AQ96I34 528 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 PIP5K1AQ99755 562 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 MAPKAP1Q9BPZ7 522 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 ARMC7Q9H6L4 198 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 C1GALT1Q9NS00 363 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 TDP1Q9NUW8 608 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 TBX21Q9UL17 535 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 ANGPT4Q9Y264 503 aa13.71□□□□□ -0.22
CD48-201ENST00000368045 CEP350Q5VT06 3117 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 METTL15A6NJ78 407 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 M0R082 166 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 PLK4O00444 970 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 MPZL2O60487 215 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 FGF18O76093 207 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 CTSLP07711 333 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 ARAFP10398 606 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 GABRB1P18505 474 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 LIPAP38571 399 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 EIF2DP41214 584 aaKnown RBP13.7□□□□□ -0.22
CD48-201ENST00000368045 CCR2P41597 374 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 XCR1P46094 333 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 LIMS1P48059 325 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 CDH12P55289 794 aa13.7□□□□□ -0.22
CD48-201ENST00000368045 PCBP3P57721 371 aaKnown RBP13.7□□□□□ -0.22
CD48-201ENST00000368045 DEFB103AP81534 67 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms