RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PABPN1LA6NDY0 278 aaKnown RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 NCF1BA6NI72 391 aaPredicted RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 NCF1CA8MVU1 366 aaPredicted RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 PTGES3LE9PB15 166 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 MANBAO00462 879 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 FAM20BO75063 409 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 ULK1O75385 1050 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 MYO1DO94832 1006 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 FTH1P02794 183 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 CBSLP0DN79 551 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 NCF1P14598 390 aaPredicted RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 TYRP14679 529 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 ZNF7P17097 686 aaPredicted RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 NDUFV2P19404 249 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 S100A3P33764 101 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 CBSP35520 551 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 ATP5C1P36542 298 aaKnown RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 WASP42768 502 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 PCYT1AP49585 367 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 IST1P53990 364 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 RPL6Q02878 288 aaKnown RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 SELENBP1Q13228 472 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 VEZF1Q14119 521 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 BOP1Q14137 746 aaKnown RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 KIAA1614Q5VZ46 1190 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 Q6ZNB5 142 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 EIF3MQ7L2H7 374 aaKnown RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 CYP4Z1Q86W10 505 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 LYSMD2Q8IV50 215 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 TCAIMQ8N3R3 496 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 LIX1Q8N485 282 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 DEFB119Q8N690 84 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 AMER2Q8N7J2 671 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 TTC29Q8NA56 475 aaPredicted RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 CNIH3Q8TBE1 160 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 FRS2Q8WU20 508 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 HPS1Q92902 700 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 METTL2AQ96IZ6 378 aaKnown RBP11.1□□□□□ -0.63
USF1-201ENST00000368019 HRASLS5Q96KN8 279 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 FCRL1Q96LA6 429 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 BBS2Q9BXC9 721 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 KLHL25Q9H0H3 589 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 SLC32A1Q9H598 525 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 IKZF5Q9H5V7 419 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 SERHLQ9NQF3 203 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 FSCN3Q9NQT6 498 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 FKBP14Q9NWM8 211 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 OPTCQ9UBM4 332 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 FKBPLQ9UIM3 349 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 TSC22D4Q9Y3Q8 395 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 ANGPTL3Q9Y5C1 460 aa11.1□□□□□ -0.63
USF1-201ENST00000368019 NUMA1Q14980 2115 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 PTPRBP23467 1997 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 SLC12A8A0AV02 714 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 FAM221BA6H8Z2 402 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 AGAP5A6NIR3 686 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 EFCAB9A8MZ26 197 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 EVPLLA8MZ36 301 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 ANKRD66B4E2M5 251 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 NEDD8-MDP1E9PL57 170 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 GFRA2O00451 464 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 TAPBPO15533 448 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 XPNPEP2O43895 674 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 ACSL4O60488 711 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 ZNF217O75362 1048 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 CLDN11O75508 207 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 GJB3O75712 270 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 C9P02748 559 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 CFIP05156 583 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 FABP3P05413 133 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 PRSS56P0CW18 603 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 CD59P13987 128 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 GPX2P18283 190 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 PPIBP23284 216 aaKnown RBP11.09□□□□□ -0.63
USF1-201ENST00000368019 PSMB9P28065 219 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 PTPN6P29350 595 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 DAPP51397 102 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 OLR1P78380 273 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 PIGFQ07326 219 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 ZRANB3Q5FWF4 1079 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 NADSYN1Q6IA69 706 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 CBLL1Q75N03 491 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 LRRC70Q7Z2Q7 622 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 GPR155Q7Z3F1 870 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 RABEPKQ7Z6M1 372 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 AKAP14Q86UN6 197 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 PIANPQ8IYJ0 282 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 HS3ST5Q8IZT8 346 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 RBFAQ8N0V3 343 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 BEND7Q8N7W2 519 aaPredicted RBP11.09□□□□□ -0.63
USF1-201ENST00000368019 C9orf43Q8TAL5 461 aaPredicted RBP11.09□□□□□ -0.63
USF1-201ENST00000368019 MYDGFQ969H8 173 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 ZHX1-C8orf76Q96EF9 292 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 MRGPRX1Q96LB2 322 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 EPYCQ99645 322 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 DCSTAMPQ9H295 470 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 CD93Q9NPY3 652 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 IL17CQ9P0M4 197 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 ZNF229Q9UJW7 825 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 NUDT5Q9UKK9 219 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms