RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 ZSWIM9Q86XI8 627 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 NPAS3Q8IXF0 933 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 C19orf18Q8NEA5 215 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CYB5D2Q8WUJ1 264 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CMTM7Q96FZ5 175 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 YME1L1Q96TA2 773 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 EMILIN2Q9BXX0 1053 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 HDHD2Q9H0R4 259 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 SERHLQ9NQF3 203 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 TAS2R9Q9NYW1 312 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 TRPS1Q9UHF7 1281 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CLEC2DQ9UHP7 191 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 ATP6V1HQ9UI12 483 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 SLC13A4Q9UKG4 626 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 PCDHGA6Q9Y5G7 932 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 LYVE1Q9Y5Y7 322 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 SPIN1Q9Y657 262 aaPredicted RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 KCNE2Q9Y6J6 123 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 RANBP2P49792 3224 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 FABP12A6NFH5 140 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 TMEM202A6NGA9 273 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 SYN3O14994 580 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CCNB2O95067 398 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 SLC16A8O95907 504 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CATP04040 527 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 AMD1P17707 334 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 SDHBP21912 280 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CSNK1DP48730 415 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 RGS6P49758 472 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 SNRPD1P62314 119 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CDK6Q00534 326 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 C1DQ13901 141 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 ZNF284Q2VY69 593 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 C5orf22Q49AR2 442 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CCDC58Q4VC31 144 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 GCNT6Q5T4J0 391 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 NXNL2Q5VZ03 156 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 KDM4DQ6B0I6 523 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CXorf57Q6NSI4 855 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 DPY19L3Q6ZPD9 716 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 PRR23CQ6ZRP0 262 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CCDC71Q8IV32 467 aaPredicted RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CADM2Q8N3J6 435 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 MRPS31Q92665 395 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 COL21A1Q96P44 957 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 IL17FQ96PD4 163 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 HTATIP2Q9BUP3 242 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 P2RY12Q9H244 342 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 ZDHHC3Q9NYG2 299 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 TRAV19A0A0A6YYK7 116 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 OR2A25A4D2G3 310 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 GLTPD2A6NH11 291 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 GLOD5A6NK44 160 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 LRRTM2O43300 516 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 ARHGEF9O43307 516 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 NME6O75414 186 aaPredicted RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 URODP06132 367 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 ADORA3P0DMS8 318 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 PSKH1P11801 424 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 HOXA9P31269 272 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CASP3P42574 277 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 MANFP55145 182 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 C22orf42Q6IC83 251 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 ERICH5Q6P6B1 374 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 PAQR6Q6TCH4 344 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 MMP21Q8N119 569 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CHST14Q8NCH0 376 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 PJA1Q8NG27 643 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 ASZ1Q8WWH4 475 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 DOHHQ9BU89 302 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 RIOK2Q9BVS4 552 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 HOXD1Q9GZZ0 328 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 IRF2BPLQ9H1B7 796 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 EQTNQ9NQ60 294 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 LHX3Q9UBR4 397 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 RUVBL1Q9Y265 456 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CARD8Q9Y2G2 431 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 AP3M1Q9Y2T2 418 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CKAP5Q14008 2032 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 A0A1W2PRU2 124 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 ZSCAN5BA6NJL1 495 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 SEPT4O43236 478 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 KLK8O60259 260 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 CR2P20023 1033 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 TNFSF8P32971 234 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 BUD31P41223 144 aaPredicted RBP10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 GSTM5P46439 218 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 SRP54P61011 504 aaKnown RBP10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 GAB1Q13480 694 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 PTGES3Q15185 160 aaKnown RBP10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 CRTC2Q53ET0 693 aaPredicted RBP10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 TRIQKQ629K1 86 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 TMEM220Q6QAJ8 160 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 PCSK9Q8NBP7 692 aaKnown RBP10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 LILRB4Q8NHJ6 448 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 HUS1BQ8NHY5 278 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 RAET1EQ8TD07 263 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 SOCS4Q8WXH5 440 aa10.6□□□□□ -0.71
NECTIN4-201ENST00000368012 YIPF6Q96EC8 236 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms