RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 CAMKVQ8NCB2 501 aa11.72□□□□□ -0.53
MRPL55-209ENST00000366735 PKP4Q99569 1192 aa11.72□□□□□ -0.53
MRPL55-209ENST00000366735 MESP1Q9BRJ9 268 aa11.72□□□□□ -0.53
MRPL55-209ENST00000366735 PCBD2Q9H0N5 130 aa11.72□□□□□ -0.53
MRPL55-209ENST00000366735 CCDC177Q9NQR7 707 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-209ENST00000366735 ABCF3Q9NUQ8 709 aa11.72□□□□□ -0.53
MRPL55-209ENST00000366735 SH3BGRL2Q9UJC5 107 aa11.72□□□□□ -0.53
MRPL55-209ENST00000366735 COMMD10Q9Y6G5 202 aa11.72□□□□□ -0.53
MRPL55-209ENST00000366735 PCNX1Q96RV3 2341 aa11.72□□□□□ -0.53
MRPL55-209ENST00000366735 PKDREJQ9NTG1 2253 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 IGKV1-8A0A0C4DH67 115 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 PABPN1LA6NDY0 278 aaKnown RBP11.71□□□□□ -0.53
MRPL55-209ENST00000366735 A8MUI8 341 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 E7ENX8 843 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 GOLGA8TH3BQL2 631 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 EIF3FO00303 357 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-209ENST00000366735 CDK2AP1O14519 115 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 HAT1O14929 419 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 FOXS1O43638 330 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 SEC24DO94855 1032 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-209ENST00000366735 CELA2AP08217 269 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 INHBAP08476 426 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 ARNTP27540 789 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 EEF1DP29692 281 aaKnown RBP11.71□□□□□ -0.53
MRPL55-209ENST00000366735 GRK3P35626 688 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 SERPINB9P50453 376 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 RIPPLY3P57055 190 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 PPP2R2AP63151 447 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 CBX1P83916 185 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 TAP2Q03519 686 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 EFTUD2Q15029 972 aaKnown RBP eCLIP11.71□□□□□ -0.531e-12■■■■■ 43.4
MRPL55-209ENST00000366735 ZNF630Q2M218 657 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-209ENST00000366735 KRTCAP3Q53RY4 240 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 ZNF470Q6ECI4 717 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 TRABD2AQ86V40 505 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 EXOC3L1Q86VI1 746 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 LMNTD2Q8IXW0 634 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 CYP4X1Q8N118 509 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 SLC5A8Q8N695 610 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 PPFIBP2Q8ND30 876 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 GABPB2Q8TAK5 448 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-209ENST00000366735 CALML6Q8TD86 181 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 MZB1Q8WU39 189 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 ZNF480Q8WV37 535 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 CDKL2Q92772 493 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 KCNJ9Q92806 393 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 ZNF669Q96BR6 464 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-209ENST00000366735 CERS2Q96G23 380 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 IMMP1LQ96LU5 166 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 UTP23Q9BRU9 249 aaKnown RBP11.71□□□□□ -0.53
MRPL55-209ENST00000366735 PRR14Q9BWN1 585 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 VN1R1Q9GZP7 353 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 CNOT10Q9H9A5 744 aaKnown RBP11.71□□□□□ -0.53
MRPL55-209ENST00000366735 KCNK13Q9HB14 408 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 ANKHQ9HCJ1 492 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 SMYD2Q9NRG4 433 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 TMEM184CQ9NVA4 438 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 CTNNAL1Q9UBT7 734 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 ADAM21Q9UKJ8 722 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 IKBKGQ9Y6K9 419 aa11.71□□□□□ -0.53
MRPL55-209ENST00000366735 IQANK1A0A1B0GTG1 560 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 CXorf49A8MYA2 514 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-209ENST00000366735 P2RX6O15547 441 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 SLC35G6P0C7Q6 338 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 IL10P22301 178 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 CCND1P24385 295 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 CNTFP26441 200 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 MST1P26927 711 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 XCR1P46094 333 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 CLCN7P51798 805 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 SLC18A1P54219 525 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 YBX1P67809 324 aaKnown RBP11.7□□□□□ -0.54
MRPL55-209ENST00000366735 MAT1AQ00266 395 aaKnown RBP11.7□□□□□ -0.54
MRPL55-209ENST00000366735 ALDH6A1Q02252 535 aaKnown RBP11.7□□□□□ -0.54
MRPL55-209ENST00000366735 SYT16Q17RD7 645 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 LGSNQ5TDP6 509 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 UGT3A1Q6NUS8 523 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 NIPAL1Q6NVV3 410 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 NEPROQ6NW34 567 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 CES3Q6UWW8 571 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 PPM1NQ8N819 430 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 OR9A4Q8NGU2 314 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 OR51Q1Q8NH59 317 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 THAP3Q8WTV1 239 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-209ENST00000366735 LPAR4Q99677 370 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 GPAMQ9HCL2 828 aa11.7□□□□□ -0.54
MRPL55-209ENST00000366735 SSU72Q9NP77 194 aaKnown RBP11.7□□□□□ -0.54
MRPL55-209ENST00000366735 CSMD1Q96PZ7 3565 aa11.69□□□□□ -0.54
MRPL55-209ENST00000366735 KCNE1BA0A087WTH5 132 aa11.69□□□□□ -0.54
MRPL55-209ENST00000366735 FAM227AF5H4B4 570 aa11.69□□□□□ -0.54
MRPL55-209ENST00000366735 H7BY64 318 aa11.69□□□□□ -0.54
MRPL55-209ENST00000366735 KRT38O76015 456 aa11.69□□□□□ -0.54
MRPL55-209ENST00000366735 GRNP28799 593 aaKnown RBP11.69□□□□□ -0.54
MRPL55-209ENST00000366735 SSTR2P30874 369 aa11.69□□□□□ -0.54
MRPL55-209ENST00000366735 SKIV2L2P42285 1042 aaKnown RBP11.69□□□□□ -0.54
MRPL55-209ENST00000366735 RGS4P49798 205 aa11.69□□□□□ -0.54
MRPL55-209ENST00000366735 GYS2P54840 703 aa11.69□□□□□ -0.54
MRPL55-209ENST00000366735 TBPL1P62380 186 aa11.69□□□□□ -0.54
MRPL55-209ENST00000366735 GABPB1Q06547 395 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-209ENST00000366735 ACER2Q5QJU3 275 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms