RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 MRPL43Q8N983 215 aaKnown RBP17.92■□□□□ 0.46
CLIP2-202ENST00000361545 ZNF689Q96CS4 500 aaPredicted RBP17.92■□□□□ 0.46
CLIP2-202ENST00000361545 RANBP9Q96S59 729 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 BHLHE41Q9C0J9 482 aaPredicted RBP17.92■□□□□ 0.46
CLIP2-202ENST00000361545 TLR4O00206 839 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 RPP14O95059 124 aaKnown RBP17.92■□□□□ 0.46
CLIP2-202ENST00000361545 SNX4O95219 450 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 BMP8BP34820 402 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 ABHD18Q0P651 414 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 BMP8AQ7Z5Y6 402 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 SYVN1Q86TM6 617 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 OR6N1Q8NGY5 312 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 CHD4Q14839 1912 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 AHSA1O95433 338 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 RASGEF1BQ0VAM2 473 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 PDCD4Q53EL6 469 aaKnown RBP17.91■□□□□ 0.46
CLIP2-202ENST00000361545 C1orf189Q5VU69 101 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 MEIOBQ8N635 442 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 EZH1Q92800 747 aaPredicted RBP17.91■□□□□ 0.46
CLIP2-202ENST00000361545 SCRN2Q96FV2 425 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 CLSTN3Q9BQT9 956 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 MS4A12Q9NXJ0 267 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 C5P01031 1676 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 FGF3P11487 239 aaPredicted RBP17.91■□□□□ 0.46
CLIP2-202ENST00000361545 FBLP22087 321 aaKnown RBP17.91■□□□□ 0.46
CLIP2-202ENST00000361545 HHEXQ03014 270 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 GALNT10Q86SR1 603 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 HHIPQ96QV1 700 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 BHMG1C9JSJ3 638 aaPredicted RBP17.91■□□□□ 0.46
CLIP2-202ENST00000361545 TRIM3O75382 744 aaPredicted RBP17.91■□□□□ 0.46
CLIP2-202ENST00000361545 GMPRP36959 345 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 KCNC1P48547 511 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 CHAF1BQ13112 559 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 KRTCAP2Q8N6L1 136 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 TRIM63Q969Q1 353 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 FAM240BA0A1B0GVZ2 78 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 NPC1O15118 1278 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 SLC35E2BP0CK96 405 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 GDE1Q9NZC3 331 aa17.91■□□□□ 0.46
CLIP2-202ENST00000361545 SPIN1Q9Y657 262 aaPredicted RBP17.91■□□□□ 0.46
CLIP2-202ENST00000361545 SMAD6O43541 496 aaKnown RBP17.9■□□□□ 0.46
CLIP2-202ENST00000361545 NOS1APO75052 506 aaPredicted RBP17.9■□□□□ 0.46
CLIP2-202ENST00000361545 CLEC3AO75596 197 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 INMTO95050 263 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 RCBTB2O95199 551 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 ZNF20P17024 532 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 HSD11B1P28845 292 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 TGFBR2P37173 567 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 RAB25P57735 213 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 PDSS1Q5T2R2 415 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 TTLL10Q6ZVT0 673 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 TMEM135Q86UB9 458 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 AURKBQ96GD4 344 aaPredicted RBP17.9■□□□□ 0.46
CLIP2-202ENST00000361545 RTCAO00442 366 aaKnown RBP17.9■□□□□ 0.46
CLIP2-202ENST00000361545 SOX14O95416 240 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 GSTM3P21266 225 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 CST5P28325 142 aaPredicted RBP17.9■□□□□ 0.46
CLIP2-202ENST00000361545 MTTPP55157 894 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 POU6F2P78424 691 aaPredicted RBP17.9■□□□□ 0.46
CLIP2-202ENST00000361545 DOC2AQ14183 400 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 ZNF234Q14588 700 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 TMEM44Q2T9K0 475 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 FLYWCH1Q4VC44 716 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 CATSPEREQ5SY80 951 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 OGFOD2Q6N063 350 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 AQP11Q8NBQ7 271 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 TOX2Q96NM4 488 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 SLC46A2Q9BY10 475 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 DEFB126Q9BYW3 111 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 SMURF2Q9HAU4 748 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 ITGB1BP2Q9UKP3 347 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 GABRA3P34903 492 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 CBX3Q13185 183 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 SYT16Q17RD7 645 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 C5orf22Q49AR2 442 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 SPATC1Q76KD6 591 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 PHOSPHO2Q8TCD6 241 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 DNAJA3Q96EY1 480 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 PYURFQ96I23 114 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 ADAD1Q96M93 576 aaKnown RBP17.9■□□□□ 0.46
CLIP2-202ENST00000361545 ASPNQ9BXN1 380 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 CXorf21Q9HAI6 301 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 NOX1Q9Y5S8 564 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 PTGDR2Q9Y5Y4 395 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 HCFC2Q9Y5Z7 792 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 MYH11P35749 1972 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 MERTKQ12866 999 aa17.9■□□□□ 0.46
CLIP2-202ENST00000361545 LAPTM4AQ15012 233 aa17.89■□□□□ 0.46
CLIP2-202ENST00000361545 AKIRIN2Q53H80 203 aa17.89■□□□□ 0.46
CLIP2-202ENST00000361545 ZDHHC1Q8WTX9 485 aa17.89■□□□□ 0.46
CLIP2-202ENST00000361545 NAV1Q8NEY1 1877 aa17.89■□□□□ 0.46
CLIP2-202ENST00000361545 A0A1W2PQ72 361 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 ADAM12O43184 909 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 AKAP8O43823 692 aaKnown RBP17.89■□□□□ 0.45
CLIP2-202ENST00000361545 IL33O95760 270 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 OR1E2P47887 323 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 SUOXP51687 545 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 GBX2P52951 348 aaPredicted RBP17.89■□□□□ 0.45
CLIP2-202ENST00000361545 RNF220Q5VTB9 566 aa17.89■□□□□ 0.45
CLIP2-202ENST00000361545 HMGN2P46Q86SG4 172 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms