RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 HIST1H2ADP20671 130 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 MAOAP21397 527 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 RGS1Q08116 209 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 SULF2Q8IWU5 870 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 MARVELD2Q8N4S9 558 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 NFAM1Q8NET5 270 aaPredicted RBP19.74■□□□□ 0.75
CD47-202ENST00000361309 NT5CQ8TCD5 201 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 HIST1H2AHQ96KK5 128 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 SIGLEC10Q96LC7 697 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 OR4K3Q96R72 315 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 HIST1H2AJQ99878 128 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 H2AFJQ9BTM1 129 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 LZTFL1Q9NQ48 299 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 IGSF5Q9NSI5 407 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 TAS2R13Q9NYV9 303 aa19.74■□□□□ 0.75
CD47-202ENST00000361309 TCRBV16S1A1N1A0A5B0 115 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 KLRC4-KLRK1H3BQV0 150 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 HS6ST1O60243 411 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 TFEBP19484 476 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 MAGEA3P43357 314 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 CDKN2DP55273 166 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 CATSPEREQ5SY80 951 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 DUPD1Q68J44 220 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 NIPAL1Q6NVV3 410 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 ABHD13Q7L211 337 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 ARMC10Q8N2F6 343 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.73■□□□□ 0.75
CD47-202ENST00000361309 C2CD4AQ8NCU7 369 aaPredicted RBP19.73■□□□□ 0.75
CD47-202ENST00000361309 OR56A3Q8NH54 315 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 UTP15Q8TED0 518 aaKnown RBP19.73■□□□□ 0.75
CD47-202ENST00000361309 LINGO1Q96FE5 620 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 SPNS1Q9H2V7 528 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 NECTIN3Q9NQS3 549 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 ARL15Q9NXU5 204 aa19.73■□□□□ 0.75
CD47-202ENST00000361309 PEX1O43933 1283 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 IGFBP2P18065 325 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 CDC25BP30305 580 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 HNF4AP41235 474 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 RAB8AP61006 207 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 CMPK2Q5EBM0 449 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 RBM20Q5T481 1227 aaKnown RBP19.72■□□□□ 0.75
CD47-202ENST00000361309 STRA8Q7Z7C7 330 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 TBC1D19Q8N5T2 526 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 RHBGQ9H310 441 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 PRDM9Q9NQV7 894 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 ZFP69BQ9UJL9 534 aa19.72■□□□□ 0.75
CD47-202ENST00000361309 IGKV3D-11A0A0A0MRZ8 115 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 NKX2-6A6NCS4 301 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 RNH1P13489 461 aaKnown RBP19.71■□□□□ 0.75
CD47-202ENST00000361309 SCTRP47872 440 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 CSHL1Q14406 222 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 TMEM211Q6ICI0 200 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 CYP4Z2PQ8N1L4 340 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 C16orf52Q8NHV5 167 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 ASB5Q8WWX0 329 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 NEIL2Q969S2 332 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 MAGOHBQ96A72 148 aaKnown RBP19.71■□□□□ 0.75
CD47-202ENST00000361309 NPDC1Q9NQX5 325 aaPredicted RBP19.71■□□□□ 0.75
CD47-202ENST00000361309 ZFATQ9P243 1243 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 RNF6Q9Y252 685 aa19.71■□□□□ 0.75
CD47-202ENST00000361309 TRBV11-1A0A0K0K1C0 115 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 CTAGE15A4D2H0 777 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 PABPN1LA6NDY0 278 aaKnown RBP19.7■□□□□ 0.74
CD47-202ENST00000361309 FAM90A27PA6NNH2 459 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 PSMD12O00232 456 aaPredicted RBP19.7■□□□□ 0.74
CD47-202ENST00000361309 PDE9AO76083 593 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 GABRB3P28472 473 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 AHRP35869 848 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 CLCN2P51788 898 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 GPR85P60893 370 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 HYAL2Q12891 473 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 MDGA2Q7Z553 956 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 CTAGE6Q86UF2 777 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 GAS2L3Q86XJ1 694 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 TMEM156Q8N614 296 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 ANKRD53Q8N9V6 530 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 ZFP62Q8NB50 900 aaPredicted RBP19.7■□□□□ 0.74
CD47-202ENST00000361309 APCDD1LQ8NCL9 501 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 ARMC2Q8NEN0 867 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 OR52N2Q8NGI0 321 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 LILRB4Q8NHJ6 448 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 SLC5A11Q8WWX8 675 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 TSNARE1Q96NA8 513 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 UCK2Q9BZX2 261 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 SLC6A16Q9GZN6 736 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 KLHL31Q9H511 634 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 CLK4Q9HAZ1 481 aaKnown RBP19.7■□□□□ 0.74
CD47-202ENST00000361309 FBXW2Q9UKT8 454 aa19.7■□□□□ 0.74
CD47-202ENST00000361309 ITGA10O75578 1167 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 GUCA1CO95843 209 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 SMIM10L1P0DMW3 83 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 CHRNB4P30926 498 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 PGGT1BP53609 377 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 AP1S2P56377 157 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 TFF3Q07654 80 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 CRYMQ14894 314 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 RPRMLQ8N4K4 120 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 NAT8LQ8N9F0 302 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 B3GNT7Q8NFL0 401 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 RND1Q92730 232 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms