RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ENPP5Q9UJA9 477 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 BAG5Q9UL15 447 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 ORC6Q9Y5N6 252 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 SNX5Q9Y5X3 404 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 U3KQV3 271 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 C1orf226A1L170 272 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 KELP23276 732 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 HTR1BP28222 390 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 GDI1P31150 447 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 MLLT10P55197 1068 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 PIGFQ07326 219 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 C2orf27AQ580R0 203 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 C10orf62Q5T681 223 aaPredicted RBP21.68■■□□□ 1.06
LDB1-201ENST00000361198 DCDC5Q6ZRR9 648 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 ANKRD13BQ86YJ7 626 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 DCUN1D3Q8IWE4 304 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 SLC15A4Q8N697 577 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 WDR48Q8TAF3 677 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 RPP25Q9BUL9 199 aaKnown RBP21.68■■□□□ 1.06
LDB1-201ENST00000361198 LMAN2LQ9H0V9 348 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 NKX2-4Q9H2Z4 354 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 SIRT5Q9NXA8 310 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 VNN3Q9NY84 501 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 MAPRE3Q9UPY8 281 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 BCAS1O75363 584 aaPredicted RBP21.67■■□□□ 1.06
LDB1-201ENST00000361198 APODP05090 189 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 GAB1Q13480 694 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 ANXA8L1Q5VT79 327 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 PARM1Q6UWI2 310 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 ZDHHC21Q8IVQ6 265 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 PIK3C3Q8NEB9 887 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 CDCA3Q99618 268 aaPredicted RBP21.67■■□□□ 1.06
LDB1-201ENST00000361198 IL1RAPQ9NPH3 570 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 B3GNT3Q9Y2A9 372 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 OR1A2Q9Y585 309 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 CKAP5Q14008 2032 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 A0A1W2PP55 124 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 BCKDKO14874 412 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 NUDT7P0C024 238 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 KDELR2P33947 212 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 SOX9P48436 509 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 GP2P55259 537 aaKnown RBP21.67■■□□□ 1.06
LDB1-201ENST00000361198 MC1RQ01726 317 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 AQP6Q13520 282 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 ENPP2Q13822 863 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 METRNLQ641Q3 311 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 ERICH5Q6P6B1 374 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 CYP4Z1Q86W10 505 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 HDDC3Q8N4P3 179 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 ZNF513Q8N8E2 541 aaPredicted RBP21.67■■□□□ 1.06
LDB1-201ENST00000361198 WARS2Q9UGM6 360 aaKnown RBP21.67■■□□□ 1.06
LDB1-201ENST00000361198 FZD4Q9ULV1 537 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 CORINQ9Y5Q5 1042 aa21.67■■□□□ 1.06
LDB1-201ENST00000361198 KLHL18O94889 574 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 ACVR2AP27037 513 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 RAPSNQ13702 412 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 PPP2R2DQ66LE6 453 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 C16orf87Q6PH81 154 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 LCTLQ6UWM7 567 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 VN1R5Q7Z5H4 357 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 OR4K1Q8NGD4 311 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 ZFP90Q8TF47 636 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 CHPT1Q8WUD6 406 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 SNRNP27Q8WVK2 155 aaKnown RBP21.66■■□□□ 1.06
LDB1-201ENST00000361198 REEP4Q9H6H4 257 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 ATP6V1HQ9UI12 483 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 RNASET2O00584 256 aaKnown RBP21.66■■□□□ 1.06
LDB1-201ENST00000361198 NTRK1P04629 796 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 ABCB1P08183 1280 aaPredicted RBP21.66■■□□□ 1.06
LDB1-201ENST00000361198 IGFBP5P24593 272 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 CAMK2GQ13555 558 aaPredicted RBP21.66■■□□□ 1.06
LDB1-201ENST00000361198 SPCS2Q15005 226 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 CTF1Q16619 201 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 TMIGD1Q6UXZ0 262 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 FAM129CQ86XR2 697 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 SYNPOQ8N3V7 929 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 OXR1Q8N573 874 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 OR5K2Q8NHB8 316 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 DGCR6LQ9BY27 220 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 CHST8Q9H2A9 424 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 HSPE1-MOB4S4R3N1 261 aa21.66■■□□□ 1.06
LDB1-201ENST00000361198 PTGES3LE9PB15 166 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 UGT2B11O75310 529 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 PAK4O96013 591 aaPredicted RBP21.65■■□□□ 1.06
LDB1-201ENST00000361198 PIK3CBP42338 1070 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 VTCN1Q7Z7D3 282 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 METTL4Q8N3J2 472 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 SETD9Q8NE22 299 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 OR4A15Q8NGL6 344 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 KLK6Q92876 244 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 CXorf40BQ96DE9 158 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 BCL7BQ9BQE9 202 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 BHLHE41Q9C0J9 482 aaPredicted RBP21.65■■□□□ 1.06
LDB1-201ENST00000361198 ABCG2Q9UNQ0 655 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 F5P12259 2224 aa21.65■■□□□ 1.06
LDB1-201ENST00000361198 INMTO95050 263 aa21.64■■□□□ 1.06
LDB1-201ENST00000361198 KLK1P06870 262 aa21.64■■□□□ 1.06
LDB1-201ENST00000361198 JUNDP17535 347 aa21.64■■□□□ 1.06
LDB1-201ENST00000361198 EMX1Q04741 257 aaPredicted RBP21.64■■□□□ 1.06
LDB1-201ENST00000361198 FGL2Q14314 439 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms