RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 AGAP6Q5VW22 663 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 ANKRD54Q6NXT1 300 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 TIGD4Q8IY51 512 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 INO80EQ8NBZ0 244 aaPredicted RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 ZC3H10Q96K80 434 aaKnown RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 AGAP4Q96P64 663 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 NUFIP1Q9UHK0 495 aaKnown RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 J3QLW9 94 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 FAAHO00519 579 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 ATP1B2P14415 290 aaPredicted RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 ZNF19P17023 458 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 FADDQ13158 208 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 NHSL2Q5HYW2 709 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 MOB2Q70IA6 237 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 SAMD12Q8N8I0 201 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 GATAD2BQ8WXI9 593 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 RPL10LQ96L21 214 aaKnown RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 PTPN18Q99952 460 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 IMP3Q9NV31 184 aaKnown RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 PCDHB11Q9Y5F2 797 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 MANSC4A6NHS7 340 aaPredicted RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 HCN1O60741 890 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 ACADMP11310 421 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 PRAMEF17Q5VTA0 474 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 RAB12Q6IQ22 244 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 DCP2Q8IU60 420 aaKnown RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 OR52B6Q8NGF0 335 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 IL12RB2Q99665 862 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 OR51I1Q9H343 314 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 HPF1Q9NWY4 346 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 NPAP1Q9NZP6 1156 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 GRXCR2A6NFK2 248 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 DNASE1L1P49184 302 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 RPS13P62277 151 aaKnown RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 TAZQ16635 292 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 TMEM130Q8N3G9 435 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 RHOXF1Q8NHV9 184 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 YIPF4Q9BSR8 244 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 EFCAB11Q9BUY7 163 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 GORASP2Q9H8Y8 452 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 FBXO9Q9UK97 447 aaPredicted RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 RGPD5Q99666 1765 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 A0A075B6Q4 140 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 H7C2Y5 167 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 ZBTB48P10074 688 aaPredicted RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 RAB2AP61019 212 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 KCNC4Q03721 635 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 ZNF155Q12901 538 aaPredicted RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 ZNF648Q5T619 568 aaPredicted RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 REEP3Q6NUK4 255 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 B3GNT9Q6UX72 402 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 MROQ9BYG7 248 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 IFT46Q9NQC8 304 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 METTL21EPA6NDL7 271 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 SOBPA7XYQ1 873 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 A8MU76 341 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 PRMT3O60678 531 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 BMP4P12644 408 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 DNASE1P24855 282 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 GABRR2P28476 465 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 UQCRC1P31930 480 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 TAS2R43P59537 309 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 WDR45BQ5MNZ6 344 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 VTCN1Q7Z7D3 282 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 TMC8Q8IU68 726 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 OR7G1Q8NGA0 311 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 FUBP1Q96AE4 644 aaKnown RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 NXPE2Q96DL1 559 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 PCBD2Q9H0N5 130 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 RSPH9Q9H1X1 276 aaPredicted RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 SYNDIG1Q9H7V2 258 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 THG1LQ9NWX6 298 aaKnown RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 MTMR10Q9NXD2 777 aa13.47□□□□□ -0.25
SMC5-201ENST00000361138 MAGED1Q9Y5V3 778 aaPredicted RBP13.47□□□□□ -0.25
SMC5-201ENST00000361138 JRKO75564 520 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 H2AFB2P0C5Z0 115 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 RBM34P42696 430 aaKnown RBP13.46□□□□□ -0.25
SMC5-201ENST00000361138 BDKRB1P46663 353 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 GSTM4Q03013 218 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 RCAN2Q14206 197 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 MAD2L1BPQ15013 274 aaPredicted RBP13.46□□□□□ -0.25
SMC5-201ENST00000361138 XKR4Q5GH76 650 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 PPP2R2DQ66LE6 453 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 BEND7Q8N7W2 519 aaPredicted RBP13.46□□□□□ -0.25
SMC5-201ENST00000361138 CXorf40BQ96DE9 158 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 CCM2Q9BSQ5 444 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 PCDHB14Q9Y5E9 798 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 TEX28O15482 410 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 ARL6IP5O75915 188 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 CLDN7O95471 211 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 ARSDP51689 593 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 ERVPABLB-1P60509 514 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 CREMQ03060 361 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 GINS1Q14691 196 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 CHST4Q8NCG5 386 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 OR8D1Q8WZ84 308 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 C3orf30Q96M34 536 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 TRPV4Q9HBA0 871 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms