RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 SPRED3Q2MJR0 410 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 CCNYL2Q5T2Q4 361 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 OR4C11Q6IEV9 310 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 SRFBP1Q8NEF9 429 aaKnown RBP20.83■□□□□ 0.92
HOXA4-201ENST00000360046 PROKR1Q8TCW9 393 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 GAL3ST3Q96A11 431 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 EGLN2Q96KS0 407 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 QRFPRQ96P65 431 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 KCNC2Q96PR1 638 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 GFM1Q96RP9 751 aaKnown RBP20.83■□□□□ 0.92
HOXA4-201ENST00000360046 TUBB6Q9BUF5 446 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 ZNF717Q9BY31 904 aaPredicted RBP20.83■□□□□ 0.92
HOXA4-201ENST00000360046 LHX9Q9NQ69 397 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 STARD5Q9NSY2 213 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 TXLNGQ9NUQ3 528 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 IRAK4Q9NWZ3 460 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 MCM8Q9UJA3 840 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 PLCL2Q9UPR0 1127 aa20.83■□□□□ 0.92
HOXA4-201ENST00000360046 URADA6NGE7 173 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 C4orf51C9J302 202 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 ANKRD28O15084 1053 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 LRATO95237 230 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 ZNF888P0CJ79 500 aaPredicted RBP20.82■□□□□ 0.92
HOXA4-201ENST00000360046 T-ENOLP0DO92 83 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 THRAP10827 490 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 CALB2P22676 271 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 JAK1P23458 1154 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 PRDX6P30041 224 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 ZNF763Q0D2J5 394 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 CYLC2Q14093 348 aaPredicted RBP20.82■□□□□ 0.92
HOXA4-201ENST00000360046 ABHD17CQ6PCB6 329 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 ZNF574Q6ZN55 896 aaPredicted RBP20.82■□□□□ 0.92
HOXA4-201ENST00000360046 YTHDF3Q7Z739 585 aaKnown RBP20.82■□□□□ 0.92
HOXA4-201ENST00000360046 FUNDC1Q8IVP5 155 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 KRTCAP2Q8N6L1 136 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 OR4D9Q8NGE8 314 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 RP9Q8TA86 221 aaKnown RBP20.82■□□□□ 0.92
HOXA4-201ENST00000360046 GFM2Q969S9 779 aaKnown RBP20.82■□□□□ 0.92
HOXA4-201ENST00000360046 ZBTB18Q99592 522 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 DPYSL5Q9BPU6 564 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 CHRNA10Q9GZZ6 450 aa20.82■□□□□ 0.92
HOXA4-201ENST00000360046 ZFHX2Q9C0A1 2572 aaPredicted RBP20.82■□□□□ 0.92
HOXA4-201ENST00000360046 ZSCAN9O15535 394 aaPredicted RBP20.81■□□□□ 0.92
HOXA4-201ENST00000360046 CBFA2T3O75081 653 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 TPP2P29144 1249 aaPredicted RBP20.81■□□□□ 0.92
HOXA4-201ENST00000360046 HERC3Q15034 1050 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 WASHC2DQ5SRD0 308 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 KMT5CQ86Y97 462 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 CDC6Q99741 560 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 ZNF768Q9H5H4 540 aaKnown RBP20.81■□□□□ 0.92
HOXA4-201ENST00000360046 COPS7BQ9H9Q2 264 aaPredicted RBP20.81■□□□□ 0.92
HOXA4-201ENST00000360046 SEMA5BQ9P283 1151 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 ZNF292O60281 2723 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 TOX3O15405 576 aaPredicted RBP20.81■□□□□ 0.92
HOXA4-201ENST00000360046 AKAP10O43572 662 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 SRPX2O60687 465 aaPredicted RBP20.81■□□□□ 0.92
HOXA4-201ENST00000360046 UNC5CO95185 931 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 GP1BAP07359 652 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 CTSBP07858 339 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 SNRPB2P08579 225 aaKnown RBP20.81■□□□□ 0.92
HOXA4-201ENST00000360046 ASMTP46597 345 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 POLR2JP52435 117 aaKnown RBP20.81■□□□□ 0.92
HOXA4-201ENST00000360046 MAPK12P53778 367 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 CLDN8P56748 225 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 KCNK10P57789 538 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 TMTC4Q5T4D3 741 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 ABHD13Q7L211 337 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 OR8K5Q8NH50 307 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 UTP15Q8TED0 518 aaKnown RBP20.81■□□□□ 0.92
HOXA4-201ENST00000360046 SLC41A2Q96JW4 573 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 TEFMQ96QE5 360 aaKnown RBP20.81■□□□□ 0.92
HOXA4-201ENST00000360046 TBCDQ9BTW9 1192 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 ADAM29Q9UKF5 820 aa20.81■□□□□ 0.92
HOXA4-201ENST00000360046 IGHV5-10-1A0A0J9YXX1 117 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 FAM234BA2RU67 622 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 PCSK2P16519 638 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 NELFEP18615 380 aaKnown RBP20.8■□□□□ 0.92
HOXA4-201ENST00000360046 IL12AP29459 219 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 GABRA4P48169 554 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 COL9A2Q14055 689 aaPredicted RBP20.8■□□□□ 0.92
HOXA4-201ENST00000360046 SPIDRQ14159 915 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 MANEAQ5SRI9 462 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 ZNF793Q6ZN11 406 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 D2HGDHQ8N465 521 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 NUDT8Q8WV74 236 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 KLHL6Q8WZ60 621 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 SLC25A23Q9BV35 468 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 DDX31Q9H8H2 851 aaKnown RBP20.8■□□□□ 0.92
HOXA4-201ENST00000360046 SCN3AQ9NY46 2000 aa20.8■□□□□ 0.92
HOXA4-201ENST00000360046 D6RAR5 112 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 TXNDC9O14530 226 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 ATP5HO75947 161 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 B3GALT4O96024 378 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 HIST1H1TP22492 207 aaPredicted RBP20.79■□□□□ 0.92
HOXA4-201ENST00000360046 ARFIP1P53367 373 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 CLNS1AP54105 237 aaKnown RBP20.79■□□□□ 0.92
HOXA4-201ENST00000360046 TAS2R50P59544 299 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 BTN3A2P78410 334 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 MXRA7P84157 204 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 RCAN2Q14206 197 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms