RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 IL26Q9NPH9 171 aa9.55□□□□□ -0.88
TRAPPC2-201ENST00000359680 DNAJC11Q9NVH1 559 aa9.55□□□□□ -0.88
TRAPPC2-201ENST00000359680 VPS29Q9UBQ0 182 aa9.55□□□□□ -0.88
TRAPPC2-201ENST00000359680 SSR3Q9UNL2 185 aa9.55□□□□□ -0.88
TRAPPC2-201ENST00000359680 SLC22A14Q9Y267 594 aa9.55□□□□□ -0.88
TRAPPC2-201ENST00000359680 DOCK3Q8IZD9 2030 aa9.55□□□□□ -0.88
TRAPPC2-201ENST00000359680 IQCMA0A1B0GVH7 501 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 SLC35F4A4IF30 521 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 FABP12A6NFH5 140 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 TMEM229AB2RXF0 380 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 SCAMP2O15127 329 aaKnown RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 PCDH7O60245 1069 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 FZD6O60353 706 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 B4GALT3O60512 393 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 MYCP01106 439 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CYP17A1P05093 508 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 ALPPP05187 535 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 SLC10A3P09131 477 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 PIPP12273 146 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CSTF2P33240 577 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CNR2P34972 360 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 SGSHP51688 502 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 IRF5Q13568 498 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 SPHARQ15513 63 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CHRNA6Q15825 494 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 FAM110CQ1W6H9 321 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 ANXA8L1Q5VT79 327 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 LYPD8Q6UX82 237 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 FAM217AQ8IXS0 508 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 AQP11Q8NBQ7 271 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 FAM46DQ8NEK8 389 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 ZFAND1Q8TCF1 268 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CLIP3Q96DZ5 547 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 DIRAS2Q96HU8 199 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 ALPK3Q96L96 1907 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 FCRL1Q96LA6 429 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 TRPM7Q96QT4 1865 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 RACGAP1Q9H0H5 632 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 LHX3Q9UBR4 397 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 BTNL2Q9UIR0 455 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 TRBV5-4A0A0C4DH59 114 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 A0A1W2PQ67 120 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 C1orf226A1L170 272 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 J3KTA2 159 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 PCDH17O14917 1159 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 GCM2O75603 506 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 PDE9AO76083 593 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 GADD45GO95257 159 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CLDN7O95471 211 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 IGHA2P01877 340 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 TSPAN19P0C672 248 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 AOAHP28039 575 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 IFNA8P32881 189 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 TGM4P49221 684 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 HNMTP50135 292 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CRISP1P54107 249 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CASP9P55211 416 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 IRF8Q02556 426 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 PCDH1Q08174 1060 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 MGAT3Q09327 533 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 FAPQ12884 760 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 GAB1Q13480 694 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 LARS2Q15031 903 aaKnown RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 PYDC2Q56P42 97 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 DGKKQ5KSL6 1271 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 SLC35F1Q5T1Q4 408 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 GLB1LQ6UWU2 654 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CHST9Q7L1S5 443 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 DEFB132Q7Z7B7 95 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 C11orf74Q86VG3 221 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CCDC28AQ8IWP9 274 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 TAGAPQ8N103 731 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 SIX5Q8N196 739 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 UBE2J2Q8N2K1 259 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 NXPE1Q8N323 547 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 GDPD1Q8N9F7 314 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 OR4A15Q8NGL6 344 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 HCAR2Q8TDS4 363 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 SNAPC3Q92966 411 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 MAGEB10Q96LZ2 347 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 IL4I1Q96RQ9 567 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 MND1Q9BWT6 205 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 ABCB9Q9NP78 766 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 NMRK2Q9NPI5 230 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 THSD1Q9NS62 852 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 ZNF282Q9UDV7 671 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 NOD1Q9Y239 953 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 FCF1Q9Y324 198 aaKnown RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 ZSCAN5BA6NJL1 495 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 ZAR1LA6NP61 321 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 ZNF780AO75290 641 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CSO75390 466 aaKnown RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CDRT1O95170 752 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CD160O95971 181 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 C8GP07360 202 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CSF3P09919 207 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CCNYL3P0C7X3 344 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 JUPP14923 745 aa9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 ENDOUP21128 410 aaKnown RBP9.54□□□□□ -0.88
TRAPPC2-201ENST00000359680 CHMP24386 653 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms