RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FGBP02675 491 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CLCN4P51793 760 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 DGKEP52429 567 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 OAZ1P54368 228 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 GRB7Q14451 532 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ESRP1Q6NXG1 681 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 C3P1Q6ZMU1 363 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 LDB1Q86U70 411 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FBXO16Q8IX29 292 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FAM83FQ8NEG4 500 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 OR4M2Q8NGB6 313 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 MAPK15Q8TD08 544 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FRS2Q8WU20 508 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SECISBP2Q96T21 854 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 MFFQ9GZY8 342 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 EXTL2Q9UBQ6 330 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 RUVBL1Q9Y265 456 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 OR10H1Q9Y4A9 318 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 OR6C65A6NJZ3 312 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 IQCF5A8MTL0 148 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 OR7A17O14581 309 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CTDSP2O14595 271 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 RPN2P04844 631 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ALDOBP05062 364 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FSHRP23945 695 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SLC26A2P50443 739 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 APLP1P51693 650 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 MLLT6P55198 1093 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 IGSF11Q5DX21 431 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 LINC00299Q6ZSB3 139 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TMEM86AQ8N2M4 240 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SPATA22Q8NHS9 363 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CASTOR1Q8WTX7 329 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TRAPPC12Q8WVT3 735 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FAM151AQ8WW52 585 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SGCDQ92629 289 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 A0A096LPI6 279 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SMCO3A2RU48 225 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CLIC1O00299 241 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 GMFGO60234 142 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CHATP28329 748 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 EMX2Q04743 252 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF33BQ06732 778 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 GRIK4Q16099 956 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 STRADAQ7RTN6 431 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 IQCHQ86VS3 1027 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SLAIN1Q8ND83 568 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 C7orf34Q96L11 122 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CALML5Q9NZT1 146 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 NRP1O14786 923 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CREBL2O60519 120 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SIX3O95343 332 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 VNN1O95497 513 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CYP2B6P20813 491 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CERS1P27544 350 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 AXLP30530 894 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CRB2Q5IJ48 1285 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF772Q68DY9 489 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FRRS1Q6ZNA5 592 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CNOT9Q92600 299 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PBDC1Q9BVG4 233 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 OR10A4Q9H209 315 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TMEM184CQ9NVA4 438 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CYTH4Q9UIA0 394 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 YARS2Q9Y2Z4 477 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 NUMBLQ9Y6R0 609 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 A0A1B0GVC2 190 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 HOXC11O43248 304 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 OPN1SWP03999 348 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PET100P0DJ07 73 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SNHG28P0DPA3 235 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PTPN2P17706 415 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PFKPQ01813 784 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 NCBP2-AS2Q69YL0 99 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 RFPL4BQ6ZWI9 263 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF438Q7Z4V0 828 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 OR8J1Q8NGP2 316 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FCAMRQ8WWV6 532 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PEX13Q92968 403 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 METTL2AQ96IZ6 378 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SLC2A6Q9UGQ3 507 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SCAMP3O14828 347 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ADAM23O75077 832 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CHIT1Q13231 466 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TBCEQ15813 527 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 EEF1DP3Q658K8 133 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PLAG1Q6DJT9 500 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 RETREG3Q86VR2 466 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 LACC1Q8IV20 430 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TCF7L1Q9HCS4 588 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SPATA31D1Q6ZQQ2 1576 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 KIAA1217Q5T5P2 1943 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PIGBOS1A0A0B4J2F0 54 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PRKYO43930 277 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 RECQL4O94761 1208 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 CYP17A1P05093 508 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 M6PRP20645 277 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF10P21506 573 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 DDX6P26196 483 aaKnown RBP eCLIP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PLD1Q13393 1074 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms