RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 HAT1O14929 419 aa8.77□□□□□ -1
UPF2-202ENST00000357604 PEX11AO75192 247 aa8.77□□□□□ -1
UPF2-202ENST00000357604 STK17BO94768 372 aa8.77□□□□□ -1
UPF2-202ENST00000357604 IL6P05231 212 aa8.77□□□□□ -1
UPF2-202ENST00000357604 PRPS1L1P21108 318 aa8.77□□□□□ -1
UPF2-202ENST00000357604 ARHGDIAP52565 204 aa8.77□□□□□ -1
UPF2-202ENST00000357604 ARG2P78540 354 aa8.77□□□□□ -1
UPF2-202ENST00000357604 B4GALNT1Q00973 533 aa8.77□□□□□ -1
UPF2-202ENST00000357604 RELAQ04206 551 aa8.77□□□□□ -1
UPF2-202ENST00000357604 ZNF763Q0D2J5 394 aa8.77□□□□□ -1
UPF2-202ENST00000357604 GALNT1Q10472 559 aaPredicted RBP8.77□□□□□ -1
UPF2-202ENST00000357604 FASTKQ14296 549 aaKnown RBP8.77□□□□□ -1
UPF2-202ENST00000357604 HPS6Q86YV9 775 aa8.77□□□□□ -1
UPF2-202ENST00000357604 SLC25A45Q8N413 288 aa8.77□□□□□ -1
UPF2-202ENST00000357604 LRRN4CLQ8ND94 238 aa8.77□□□□□ -1
UPF2-202ENST00000357604 FAM162AQ96A26 154 aa8.77□□□□□ -1
UPF2-202ENST00000357604 TMCO6Q96DC7 493 aa8.77□□□□□ -1
UPF2-202ENST00000357604 REXO5Q96IC2 774 aaKnown RBP8.77□□□□□ -1
UPF2-202ENST00000357604 OR1F2PQ96R84 312 aa8.77□□□□□ -1
UPF2-202ENST00000357604 SLC25A23Q9BV35 468 aa8.77□□□□□ -1
UPF2-202ENST00000357604 NEUROD4Q9HD90 331 aa8.77□□□□□ -1
UPF2-202ENST00000357604 DMRT3Q9NQL9 472 aa8.77□□□□□ -1
UPF2-202ENST00000357604 LEF1Q9UJU2 399 aaPredicted RBP8.77□□□□□ -1
UPF2-202ENST00000357604 PRRC2BQ5JSZ5 2229 aaKnown RBP8.77□□□□□ -1.01
UPF2-202ENST00000357604 AGAP14A8MT82 685 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 NDUFB5O43674 189 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 DLX3O60479 287 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 C8orf89P0DMQ9 161 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 COPZ1P61923 177 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 SLAMF1Q13291 335 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 DECR1Q16698 335 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 ZNF789Q5FWF6 425 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 ADAMTS14Q8WXS8 1223 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 FKBP10Q96AY3 582 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 TMEM120AQ9BXJ8 343 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 GNGT2O14610 69 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 SLC22A3O75751 556 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 CD59P13987 128 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 CD1CP29017 333 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 DNASE1L3Q13609 305 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 CUL3Q13618 768 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 FAM182AQ5T1J6 154 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 ZCCHC23Q6ZST2 131 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 ISCA2Q86U28 154 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 EXOC3L1Q86VI1 746 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 RFWD2Q8NHY2 731 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 ECSITQ9BQ95 431 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 LYRM4Q9HD34 91 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 RXFP3Q9NSD7 469 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 PTBP2Q9UKA9 531 aaKnown RBP8.77□□□□□ -1.01
UPF2-202ENST00000357604 PCTPQ9UKL6 214 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 ZNF451Q9Y4E5 1061 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 MAU2Q9Y6X3 613 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 MIA3Q5JRA6 1907 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 KLK10O43240 276 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 DPM1O60762 260 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 CELA2BP08218 269 aaPredicted RBP8.77□□□□□ -1.01
UPF2-202ENST00000357604 LIPCP11150 499 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 PVRP15151 417 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 TARDBPQ13148 414 aaKnown RBP eCLIP8.77□□□□□ -1.016e-7■■□□□ 13.3
UPF2-202ENST00000357604 NSDHLQ15738 373 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 DEFB134Q4QY38 66 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 KHDC1Q4VXA5 237 aaKnown RBP8.77□□□□□ -1.01
UPF2-202ENST00000357604 RRM2BQ7LG56 351 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 LRRC25Q8N386 305 aaPredicted RBP8.77□□□□□ -1.01
UPF2-202ENST00000357604 D2HGDHQ8N465 521 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 C1orf52Q8N6N3 182 aaKnown RBP8.77□□□□□ -1.01
UPF2-202ENST00000357604 PNPLA1Q8N8W4 532 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 OR51Q1Q8NH59 317 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 PEX11GQ96HA9 241 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 MCMBPQ9BTE3 642 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 Q9N2J8 555 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 TIMMDC1Q9NPL8 285 aa8.77□□□□□ -1.01
UPF2-202ENST00000357604 FAM32AQ9Y421 112 aaKnown RBP8.77□□□□□ -1.01
UPF2-202ENST00000357604 MN1Q10571 1320 aaPredicted RBP8.76□□□□□ -1.01
UPF2-202ENST00000357604 GPR39O43194 453 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 GDF5P43026 501 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 HKDC1Q2TB90 917 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 VRK3Q8IV63 474 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 CKAP2Q8WWK9 683 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 RPF2Q9H7B2 306 aaKnown RBP8.76□□□□□ -1.01
UPF2-202ENST00000357604 PRDM9Q9NQV7 894 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 SPHK1Q9NYA1 384 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 SLC17A7Q9P2U7 560 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 MKL2Q9ULH7 1088 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 MAP4K5Q9Y4K4 846 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 ORC6Q9Y5N6 252 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 MKRN2OSH3BPM6 223 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 RAB40ALP0C0E4 278 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 CD46P15529 392 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 PORP16435 677 aaPredicted RBP8.76□□□□□ -1.01
UPF2-202ENST00000357604 TSPAN8P19075 237 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 TIA1P31483 386 aaKnown RBP eCLIP8.76□□□□□ -1.01
UPF2-202ENST00000357604 DCAF7P61962 342 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 PPP4R4Q6NUP7 873 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 PATE1Q8WXA2 126 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 ASB15Q8WXK1 588 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 ISL2Q96A47 359 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 MTERF3Q96E29 417 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 EPN3Q9H201 632 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms