RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PHACTR1Q9C0D0 580 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 DMGDHQ9UI17 866 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 PTBP2Q9UKA9 531 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 SPTAN1Q13813 2472 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 IGKV3D-11A0A0A0MRZ8 115 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 A8MUI8 341 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 MAGEB17A8MXT2 336 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 NDC80O14777 642 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 LDLRP01130 860 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 GP1BBP13224 206 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 GGT5P36269 586 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 HNMTP50135 292 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 SLC12A2P55011 1212 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 SLC26A5P58743 744 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 ZNF33BQ06732 778 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 RGS1Q08116 209 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 NSDHLQ15738 373 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 ZNF468Q5VIY5 522 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 ISCA2Q86U28 154 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 GPSM1Q86YR5 675 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 CENPLQ8N0S6 344 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 RNF175Q8N4F7 328 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 PDPRQ8NCN5 879 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 SSC4DQ8WTU2 575 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 KCTD4Q8WVF5 259 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 CDKL2Q92772 493 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 KIAA1191Q96A73 305 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 NXNL1Q96CM4 212 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 MS4A6EQ96DS6 147 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 SIGLEC12Q96PQ1 595 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 OR1F2PQ96R84 312 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 ATOH8Q96SQ7 321 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 SLX1AQ9BQ83 275 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 FAM129AQ9BZQ8 928 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 RAB17Q9H0T7 212 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 RHBGQ9H310 441 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 ALG9Q9H6U8 611 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 ANKRD10Q9NXR5 420 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 WWOXQ9NZC7 414 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 COPG2Q9UBF2 871 aa15.71■□□□□ 0.11
PDLIM7-201ENST00000355572 LRRC14BA6NHZ5 514 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 A8MUA0 341 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 UBXN8O00124 270 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 PCDH17O14917 1159 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 CLDN1O95832 211 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 SERPINA6P08185 405 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 GSTA2P09210 222 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 MTHFD2P13995 350 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 TFEBP19484 476 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 MST1P26927 711 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 COL8A1P27658 744 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 ECHS1P30084 290 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 PPP2R1BP30154 601 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 DOC2AQ14183 400 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 SLMAPQ14BN4 828 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 GRTP1Q5TC63 336 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 FAM219BQ5XKK7 198 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 RPUSD3Q6P087 351 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 ST6GALNAC3Q8NDV1 305 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 NFAM1Q8NET5 270 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 TSPAN17Q96FV3 270 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 DNAJC11Q9NVH1 559 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 NINJ2Q9NZG7 142 aa15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 DIDO1Q9BTC0 2240 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-201ENST00000355572 MYOCOSA0A1B0GUC4 107 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 LRIT2A6NDA9 550 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 WIPF3A6NGB9 483 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 URI1O94763 535 aaPredicted RBP15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 CYC1P08574 325 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 GNAZP19086 355 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 SPRP35270 261 aaPredicted RBP15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 KCNK10P57789 538 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 OR4D2P58180 307 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 BTN3A2P78410 334 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 CAV1Q03135 178 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 ADPRMQ3LIE5 342 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 C8orf74Q6P047 294 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 TMIGD1Q6UXZ0 262 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 ABHD13Q7L211 337 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 UBE3DQ7Z6J8 389 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 SNX31Q8N9S9 440 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 TRPV3Q8NET8 790 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 WDR34Q96EX3 536 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 PTCHD1Q96NR3 888 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 CSF3RQ99062 836 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 KCNK13Q9HB14 408 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 CD274Q9NZQ7 290 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 TXNDC16Q9P2K2 825 aa15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 PLEKHB1Q9UF11 243 aaPredicted RBP15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 C19orf25Q9UFG5 118 aaPredicted RBP15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 SPTBN1Q01082 2364 aaKnown RBP15.69■□□□□ 0.1
PDLIM7-201ENST00000355572 TCRBV16S1A1N1A0A5B0 115 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 DYTNA2CJ06 578 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 OR5H15A6NDH6 313 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 ERI3O43414 337 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 CCNT2O60583 730 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 SH3BGRLO75368 114 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 STK16O75716 305 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 CERS1P27544 350 aa15.68■□□□□ 0.1
PDLIM7-201ENST00000355572 ATP6V0D1P61421 351 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms