RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 KRR1Q13601 381 aaKnown RBP9.35□□□□□ -0.91
GABPA-201ENST00000354828 GBX1Q14549 363 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 ZNF77Q15935 545 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 FLYWCH1Q4VC44 716 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 SLC9B1Q4ZJI4 515 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 ARMC3Q5W041 872 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 C11orf88Q6PI97 169 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 ATG14Q6ZNE5 492 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 THAP5Q7Z6K1 395 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 SLC44A3Q8N4M1 653 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 ROPN1LQ96C74 230 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 MARK1Q9P0L2 795 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 POU2F3Q9UKI9 436 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 HS3ST2Q9Y278 367 aa9.35□□□□□ -0.91
GABPA-201ENST00000354828 DDX60LQ5H9U9 1706 aaKnown RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 CIB4A0PJX0 185 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 C1orf226A1L170 272 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 NR2C1P13056 603 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 CD1DP15813 335 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 SLC6A9P48067 706 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 CORO7P57737 925 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 TFF2Q03403 129 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 GANABQ14697 944 aaKnown RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 TIMM50Q3ZCQ8 353 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 OR52E8Q6IFG1 317 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 KIAA1211LQ6NV74 962 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 RANBP10Q6VN20 620 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 GPAT4Q86UL3 456 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 KLHDC8AQ8IYD2 350 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 OR8H2Q8N162 312 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 SYNPOQ8N3V7 929 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 RASGEF1AQ8N9B8 481 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 OR6K6Q8NGW6 343 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 TRIM2Q9C040 744 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 SH3BGRL2Q9UJC5 107 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 OPN1SWP03999 348 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 IL3P08700 152 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 G6PDP11413 515 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 CCNOP22674 350 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 SELENOVP59797 346 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 RPS3AP61247 264 aaKnown RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 TARDBPQ13148 414 aaKnown RBP eCLIP9.34□□□□□ -0.91
GABPA-201ENST00000354828 KIR2DS3Q14952 304 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 TMEM35AQ53FP2 167 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 FAM109BQ6ICB4 259 aaPredicted RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 ISLR2Q6UXK2 745 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 FRRS1Q6ZNA5 592 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 NANOGNBQ7Z5D8 188 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 PDZD3Q86UT5 571 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 CHERPQ8IWX8 916 aaKnown RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 FAM160A2Q8N612 972 aaPredicted RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 OR52E1Q8NGJ3 308 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 OR1F2PQ96R84 312 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 TMEM168Q9H0V1 697 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 ARRDC1-AS1Q9H2J1 176 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 TIGARQ9NQ88 270 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 GEMIN8Q9NWZ8 242 aaKnown RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 MRPS7Q9Y2R9 242 aaKnown RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 COL4A5P29400 1685 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 CD63P08962 238 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 ADAM17P78536 824 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 FOXK1P85037 733 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 HSF2Q03933 536 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 COX10Q12887 443 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 DLG1Q12959 904 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 SYT16Q17RD7 645 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 C3orf38Q5JPI3 329 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 NOXRED1Q6NXP6 359 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 HIPK1Q86Z02 1210 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 PGAM4Q8N0Y7 254 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 SPEM1Q8N4L4 309 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 UXS1Q8NBZ7 420 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 GIPC3Q8TF64 312 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 FGF14Q92915 247 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 CCNL2Q96S94 520 aaPredicted RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 G6PC3Q9BUM1 346 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 C6orf62Q9GZU0 229 aaPredicted RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 MUC13Q9H3R2 512 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 REEP4Q9H6H4 257 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 STARD5Q9NSY2 213 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 DKK3Q9UBP4 350 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 ABLIM1O14639 778 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 SEC14L5O43304 696 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 MYL9P24844 172 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 DNAJB1P25685 340 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 CD68P34810 354 aaPredicted RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 RORAP35398 523 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 MRPS35P82673 323 aaKnown RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 CDK6Q00534 326 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 ZNF678Q5SXM1 525 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 TMEM225Q6GV28 225 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 USP30Q70CQ3 517 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 HPS6Q86YV9 775 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 SLC34A3Q8N130 599 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 LRRC25Q8N386 305 aaPredicted RBP9.34□□□□□ -0.91
GABPA-201ENST00000354828 MDGA1Q8NFP4 955 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 ZDHHC2Q9UIJ5 367 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 NFS1Q9Y697 457 aa9.34□□□□□ -0.91
GABPA-201ENST00000354828 PRSS51A0A1B0GVH4 220 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms