RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 KLHL42Q9P2K6 505 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 ERVK-18Q9QC07 812 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 NR5A2O00482 541 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 TSPAN12O95859 305 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 CCNYL3P0C7X3 344 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 CD72P21854 359 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 POU1F1P28069 291 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 CCT3P49368 545 aaKnown RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 PRIM2P49643 509 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 FAM83EQ2M2I3 478 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 KIAA1324Q6UXG2 1013 aaKnown RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 PIAS4Q8N2W9 510 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 FSTL5Q8N475 847 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 ANKFN1Q8N957 763 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 USP7Q93009 1102 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 AP2M1Q96CW1 435 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 MRGPRX1Q96LB2 322 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 GPR21Q99679 349 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 SLC30A3Q99726 388 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 C9orf16Q9BUW7 83 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 CDCP1Q9H5V8 836 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 EHD3Q9NZN3 535 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 DHRS7Q9Y394 339 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 NEMP2A6NFY4 417 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 SGTAO43765 313 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 NIPSNAP2O75323 286 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 NDUFS6O75380 124 aaKnown RBP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 VPS26AO75436 327 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 CPNE6O95741 557 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 CD1DP15813 335 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 M6PRP20645 277 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 CRHBPP24387 322 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 KCNC1P48547 511 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 C19orf57Q0VDD7 668 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 CTU2Q2VPK5 515 aaKnown RBP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF284Q2VY69 593 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 TECRLQ5HYJ1 363 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 PAQR3Q6TCH7 311 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 TMPRSS9Q7Z410 1059 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 PELI3Q8N2H9 469 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 PARP16Q8N5Y8 322 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 OR10Q1Q8NGQ4 319 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 AKAP1Q92667 903 aaKnown RBP eCLIP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 PDLIM5Q96HC4 596 aaKnown RBP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 NODALQ96S42 347 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 MRPL57Q9BQC6 102 aaKnown RBP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 DERL2Q9GZP9 239 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 SLC6A17Q9H1V8 727 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 GRID2O43424 1007 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF780AO75290 641 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF254O75437 659 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 AP2A2O94973 939 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 GLAP06280 429 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 FHP07954 510 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 BMP2P12643 396 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 TEAD1P28347 426 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 PIGAP37287 484 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 RPL14P50914 215 aaKnown RBP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 EMX1Q04741 257 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 C21orf62-AS1Q17RA5 79 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 VPS26BQ4G0F5 336 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 ESCO2Q56NI9 601 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF517Q6ZMY9 492 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 GALNT5Q7Z7M9 940 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 ISCA2Q86U28 154 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 GLCCI1Q86VQ1 547 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 P2RY8Q86VZ1 359 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 VANGL1Q8TAA9 524 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 RORBQ92753 470 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 GLYATL1Q969I3 302 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 LGALS12Q96DT0 336 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 ALG2Q9H553 416 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 AMBNQ9NP70 447 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 ENOPH1Q9UHY7 261 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 ZFR2Q9UPR6 939 aaKnown RBP9.72□□□□□ -0.85
SYNE1-203ENST00000354674 PDE10AQ9Y233 779 aa9.72□□□□□ -0.85
SYNE1-203ENST00000354674 TRAV20A0A0B4J274 112 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 TCRBV3S1A0A5B6 114 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 BTN3A3O00478 584 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 PDPK1O15530 556 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 PROS1P07225 676 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 ATP1B2P14415 290 aaPredicted RBP9.71□□□□□ -0.85
SYNE1-203ENST00000354674 NDUFV2P19404 249 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 HAAOP46952 286 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 KPNA2P52292 529 aaKnown RBP9.71□□□□□ -0.85
SYNE1-203ENST00000354674 ADPRHP54922 357 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 CYP4F2P78329 520 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 IL5RAQ01344 420 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 CYP4F3Q08477 520 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 CSHL1Q14406 222 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 GBX1Q14549 363 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 SMN1Q16637 294 aaKnown RBP9.71□□□□□ -0.85
SYNE1-203ENST00000354674 FLYWCH1Q4VC44 716 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 YIF1BQ5BJH7 314 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 SLX4IPQ5VYV7 408 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 ZYG11AQ6WRX3 759 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 NKAPQ8N5F7 415 aaKnown RBP9.71□□□□□ -0.85
SYNE1-203ENST00000354674 CLDN19Q8N6F1 224 aa9.71□□□□□ -0.85
SYNE1-203ENST00000354674 SIDT2Q8NBJ9 832 aaKnown RBP9.71□□□□□ -0.85
SYNE1-203ENST00000354674 SIMC1Q8NDZ2 872 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms