RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 OR2L5Q8NG80 312 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 CT55Q8WUE5 264 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 ANKHQ9HCJ1 492 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 ZNF304Q9HCX3 659 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 ZDHHC2Q9UIJ5 367 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 FER1L5A0AVI2 2057 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 ZNF860A6NHJ4 632 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 TMEM114B3SHH9 223 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 ULK1O75385 1050 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 CRCPO75575 148 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 KLHL18O94889 574 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 HSPA4LO95757 839 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 AGXTP21549 392 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 PTX3P26022 381 aaPredicted RBP21.02■□□□□ 0.95
SHMT1-203ENST00000354098 SLC1A6P48664 564 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 PHEXP78562 749 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 HERC3Q15034 1050 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 SYT16Q17RD7 645 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 PRMT9Q6P2P2 845 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 CHSY3Q70JA7 882 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 COX15Q7KZN9 410 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 AMER3Q8N944 861 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 KCNE4Q8WWG9 221 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 GAL3ST3Q96A11 431 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 COL26A1Q96A83 441 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 MVB12AQ96EY5 273 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 C17orf62Q9BQA9 187 aa21.02■□□□□ 0.95
SHMT1-203ENST00000354098 DPH2Q9BQC3 489 aaPredicted RBP21.02■□□□□ 0.95
SHMT1-203ENST00000354098 RTCAO00442 366 aaKnown RBP21.01■□□□□ 0.95
SHMT1-203ENST00000354098 AZIN1O14977 448 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 GALR3O60755 368 aaPredicted RBP21.01■□□□□ 0.95
SHMT1-203ENST00000354098 NSA2O95478 260 aaKnown RBP21.01■□□□□ 0.95
SHMT1-203ENST00000354098 UROSP10746 265 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 TCN2P20062 427 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 F8A1P23610 371 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 AVPR1BP47901 424 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 BTN3A2P78410 334 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 MAT1AQ00266 395 aaKnown RBP21.01■□□□□ 0.95
SHMT1-203ENST00000354098 SRSF6Q13247 344 aaKnown RBP21.01■□□□□ 0.95
SHMT1-203ENST00000354098 SH2D4BQ5SQS7 431 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 ABHD17CQ6PCB6 329 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 FAM198BQ6UWH4 519 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 VASH2Q86V25 355 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 OR5T3Q8NGG3 340 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 ZCCHC14Q8WYQ9 949 aaKnown RBP21.01■□□□□ 0.95
SHMT1-203ENST00000354098 SORT1Q99523 831 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 SORBS1Q9BX66 1292 aaKnown RBP21.01■□□□□ 0.95
SHMT1-203ENST00000354098 MANSC1Q9H8J5 431 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 INTS9Q9NV88 658 aaKnown RBP21.01■□□□□ 0.95
SHMT1-203ENST00000354098 IFT80Q9P2H3 777 aaPredicted RBP21.01■□□□□ 0.95
SHMT1-203ENST00000354098 CROTQ9UKG9 612 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 CDC14AQ9UNH5 594 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 RAXQ9Y2V3 346 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 TRAF6Q9Y4K3 522 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 ZFHX4Q86UP3 3567 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 IGF2RP11717 2491 aa21.01■□□□□ 0.95
SHMT1-203ENST00000354098 RDH16O75452 317 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 ONECUT2O95948 504 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 FGF4P08620 206 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 EIF2S3P41091 472 aaKnown RBP21■□□□□ 0.95
SHMT1-203ENST00000354098 FOXL2P58012 376 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 OLR1P78380 273 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 C10orf62Q5T681 223 aaPredicted RBP21■□□□□ 0.95
SHMT1-203ENST00000354098 ARHGAP40Q5TG30 622 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 MLIPQ5VWP3 458 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 KANK2Q63ZY3 851 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 TRIM40Q6P9F5 258 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 PRDM7Q9NQW5 492 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 PSD3Q9NYI0 1048 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 SCN3AQ9NY46 2000 aa21■□□□□ 0.95
SHMT1-203ENST00000354098 TERTO14746 1132 aaKnown RBP20.99■□□□□ 0.95
SHMT1-203ENST00000354098 FBLP22087 321 aaKnown RBP20.99■□□□□ 0.95
SHMT1-203ENST00000354098 DLSTP36957 453 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 CUL3Q13618 768 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 UGT3A2Q3SY77 523 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 TMEM35AQ53FP2 167 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 PROSER1Q86XN7 944 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 TMEM151BQ8IW70 566 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 ZNF781Q8N8C0 355 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 ZNF75CPQ92670 426 aaPredicted RBP20.99■□□□□ 0.95
SHMT1-203ENST00000354098 FAR2Q96K12 515 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 QRFPRQ96P65 431 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 HCN3Q9P1Z3 774 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 PPT2Q9UMR5 302 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 SLC12A4Q9UP95 1085 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 DNAJC15Q9Y5T4 150 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 PTGDR2Q9Y5Y4 395 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 APC2O95996 2303 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 H0YIG0 161 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 PLPP1O14494 284 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 KLK10O43240 276 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 CNOT3O75175 753 aaKnown RBP20.99■□□□□ 0.95
SHMT1-203ENST00000354098 DSG2Q14126 1118 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 FAM69BQ5VUD6 431 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 ZNF793Q6ZN11 406 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 CLYBLQ8N0X4 340 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 DCBLD2Q96PD2 775 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 SERPINI1Q99574 410 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 YIPF2Q9BWQ6 316 aa20.99■□□□□ 0.95
SHMT1-203ENST00000354098 MRPL1Q9BYD6 325 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms