RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 DNAJA1P31689 397 aaKnown RBP11.72□□□□□ -0.53
SMAD9-201ENST00000350148 MMP12P39900 470 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 BCAP31P51572 246 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 RGS8P57771 180 aaPredicted RBP11.72□□□□□ -0.53
SMAD9-201ENST00000350148 TAS2R50P59544 299 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 YPEL5P62699 121 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ABRAXAS2Q15018 415 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 BCL7AQ4VC05 210 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 TRIQKQ629K1 86 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ASB12Q8WXK4 309 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 SLC7A6OSQ96CW6 309 aaPredicted RBP11.72□□□□□ -0.53
SMAD9-201ENST00000350148 SLC45A3Q96JT2 553 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 C1QTNF1Q9BXJ1 281 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ZNF221Q9UK13 617 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 PTBP2Q9UKA9 531 aaKnown RBP11.72□□□□□ -0.53
SMAD9-201ENST00000350148 A0A0G2JMZ2 1700 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 PRAMEF12O95522 483 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 PRSS56P0CW18 603 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 RPL10P27635 214 aaKnown RBP11.71□□□□□ -0.53
SMAD9-201ENST00000350148 IDH2P48735 452 aaKnown RBP11.71□□□□□ -0.53
SMAD9-201ENST00000350148 SLC9A3P48764 834 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 DAG1Q14118 895 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 GRB7Q14451 532 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 PDZK1Q5T2W1 519 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 ASPGQ86U10 573 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 AMIGO1Q86WK6 493 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 NRROSQ86YC3 692 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 NRG4Q8WWG1 115 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 ZDHHC12Q96GR4 267 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 IL1RAPQ9NPH3 570 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 CYP8B1Q9UNU6 501 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 CCL26Q9Y258 94 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 CCRL2O00421 344 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 BCKDKO14874 412 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 DPP6P42658 865 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 CAPZA2P47755 286 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 SLC6A11P48066 632 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 CDK9P50750 372 aaKnown RBP11.71□□□□□ -0.53
SMAD9-201ENST00000350148 EPHA5P54756 1037 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 ITGA1P56199 1179 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 VBP1P61758 197 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 CDK3Q00526 305 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 ZIK1Q3SY52 487 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-201ENST00000350148 UTP4Q969X6 686 aaKnown RBP11.71□□□□□ -0.53
SMAD9-201ENST00000350148 FKBP10Q96AY3 582 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 ACTL8Q9H568 366 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 FBRSL1Q9HCM7 1045 aaKnown RBP11.71□□□□□ -0.53
SMAD9-201ENST00000350148 CUEDC1Q9NWM3 386 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-201ENST00000350148 UTS2RQ9UKP6 389 aa11.71□□□□□ -0.53
SMAD9-201ENST00000350148 NUDT14O95848 222 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 PRKACAP17612 351 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 DUSP3P51452 185 aaPredicted RBP11.71□□□□□ -0.54
SMAD9-201ENST00000350148 DIO3P55073 304 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 RPS27LQ71UM5 84 aaKnown RBP11.71□□□□□ -0.54
SMAD9-201ENST00000350148 OR9I1Q8NGQ6 314 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 PIGXQ8TBF5 258 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 PYURFQ96I23 114 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 LIN28AQ9H9Z2 209 aaKnown RBP11.71□□□□□ -0.54
SMAD9-201ENST00000350148 CREG1O75629 220 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 CCNKO75909 580 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 GM2AP17900 193 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 PPP1R3AQ16821 1122 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 TANGO2Q6ICL3 276 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 USP30Q70CQ3 517 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 KCNK13Q9HB14 408 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 HHATLQ9HCP6 504 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 HEBP1Q9NRV9 189 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 COPS7AQ9UBW8 275 aa11.71□□□□□ -0.54
SMAD9-201ENST00000350148 AGRPO00253 132 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 NR2F6P10588 404 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 CDK6Q00534 326 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 CREB5Q02930 508 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 IL18R1Q13478 541 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 NEDD8Q15843 81 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 SLC22A15Q8IZD6 547 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 LMX1AQ8TE12 382 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 SLC9A6Q92581 669 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 OR51B5Q9H339 312 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 DLGAP4Q9Y2H0 992 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 DOCK5Q9H7D0 1870 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 ZNFX1Q9P2E3 1918 aaKnown RBP11.7□□□□□ -0.54
SMAD9-201ENST00000350148 C1orf226A1L170 272 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 PDLIM1O00151 329 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 NCK1P16333 377 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 CLCN7P51798 805 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 SHHQ15465 462 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 NANOGP8Q6NSW7 305 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 RABEPKQ7Z6M1 372 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 NLRP8Q86W28 1048 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 DPP10Q8N608 796 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 COX18Q8N8Q8 333 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 FAM47BQ8NA70 645 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 ACVR1CQ8NER5 493 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 TOR1AIP2Q8NFQ8 470 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 WDR83Q9BRX9 315 aaKnown RBP11.7□□□□□ -0.54
SMAD9-201ENST00000350148 ADI1Q9BV57 179 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 MAGIXQ9H6Y5 334 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 NANOGQ9H9S0 305 aa11.7□□□□□ -0.54
SMAD9-201ENST00000350148 RAPGEFL1Q9UHV5 662 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms