RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 ZNF473Q8WTR7 871 aaKnown RBP20.87■□□□□ 0.93
SNX3-202ENST00000349379 PHF21BQ96EK2 531 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 VPS50Q96JG6 964 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 OR1F2PQ96R84 312 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 SLC25A23Q9BV35 468 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 C1QTNF3Q9BXJ4 246 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 VN1R1Q9GZP7 353 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 ZNF71Q9NQZ8 489 aaPredicted RBP20.87■□□□□ 0.93
SNX3-202ENST00000349379 LANCL2Q9NS86 450 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 PCTPQ9UKL6 214 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 ANGPTL3Q9Y5C1 460 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 CFAP46Q8IYW2 2715 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 CPAMD8Q8IZJ3 1885 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 A0A1W2PPM1 405 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 A8MT66 165 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 B8ZZF3 427 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 GOLGA8RI6L899 631 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 MASP2O00187 686 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 HEXBP07686 556 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 ACPPP15309 386 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 SLCO1A2P46721 670 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 NFATC3Q12968 1075 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 MED27Q6P2C8 311 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 L3MBTL4Q8NA19 623 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 CLEC1AQ8NC01 280 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 OR2L5Q8NG80 312 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 OR7G3Q8NG95 312 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 PEX11GQ96HA9 241 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 QRFPRQ96P65 431 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 NUDT9Q9BW91 350 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 MS4A8Q9BY19 250 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 IPPKQ9H8X2 491 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 ZBTB26Q9HCK0 441 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 RAB21Q9UL25 225 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 MKL2Q9ULH7 1088 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 PCDHGB7Q9Y5F8 929 aa20.86■□□□□ 0.93
SNX3-202ENST00000349379 OR7A17O14581 309 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 CHST10O43529 356 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 CDH16O75309 829 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 ALOX12BO75342 701 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 HPP00738 406 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 COX6A1P12074 109 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 NR1D1P20393 614 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 SERPINB1P30740 379 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 HPDP32754 393 aaPredicted RBP20.85■□□□□ 0.93
SNX3-202ENST00000349379 OLR1P78380 273 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 AIMP2Q13155 320 aaKnown RBP20.85■□□□□ 0.93
SNX3-202ENST00000349379 GALNT16Q8N428 558 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 CCT6BQ92526 530 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 C8orf44Q96CB5 159 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 SMAD5Q99717 465 aaKnown RBP20.85■□□□□ 0.93
SNX3-202ENST00000349379 NTMT1Q9BV86 223 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 PARD6BQ9BYG5 372 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 REXO4Q9GZR2 422 aaKnown RBP20.85■□□□□ 0.93
SNX3-202ENST00000349379 ATP13A2Q9NQ11 1180 aa20.85■□□□□ 0.93
SNX3-202ENST00000349379 FOXO6A8MYZ6 492 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 H0YIV9 168 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 ERI3O43414 337 aaKnown RBP20.84■□□□□ 0.93
SNX3-202ENST00000349379 RHAGQ02094 409 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 MYBPC3Q14896 1274 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 ABHD17CQ6PCB6 329 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 MREGQ8N565 214 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 PLPP5Q8NEB5 264 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 ZNF483Q8TF39 744 aaPredicted RBP20.84■□□□□ 0.93
SNX3-202ENST00000349379 TBC1D20Q96BZ9 403 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 NPLQ9BXD5 320 aaPredicted RBP20.84■□□□□ 0.93
SNX3-202ENST00000349379 NOL11Q9H8H0 719 aaKnown RBP20.84■□□□□ 0.93
SNX3-202ENST00000349379 ACTR8Q9H981 624 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 GPR83Q9NYM4 423 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 DCDC2Q9UHG0 476 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 ADGRE2Q9UHX3 823 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 EMCNQ9ULC0 261 aa20.84■□□□□ 0.93
SNX3-202ENST00000349379 IGHV1-45A0A0A0MS14 117 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 FHP07954 510 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 C8orf89P0DMQ9 161 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 PIK3CBP42338 1070 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 Q0VFX4 171 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 TRAF3Q13114 568 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 PCOLCEQ15113 449 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 MINDY4Q4G0A6 757 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 TRIM40Q6P9F5 258 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 CA13Q8N1Q1 262 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 RIBC1Q8N443 379 aaPredicted RBP20.83■□□□□ 0.93
SNX3-202ENST00000349379 OR52B6Q8NGF0 335 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 OR2W6PQ8NHA6 318 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 NSUN5Q96P11 429 aaKnown RBP20.83■□□□□ 0.93
SNX3-202ENST00000349379 PRDM7Q9NQW5 492 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 PCDHGA11Q9Y5H2 935 aa20.83■□□□□ 0.93
SNX3-202ENST00000349379 A0A0G2JN53 185 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 A6NL46 340 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 SMIM23A6NLE4 172 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 DLX3O60479 287 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 GLRA3O75311 464 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 TAC1P20366 129 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 PGDP52209 483 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 BTN3A2P78410 334 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 FAAH2Q6GMR7 532 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 ASB18Q6ZVZ8 466 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 NDUFAF7Q7L592 441 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 UBE3DQ7Z6J8 389 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms