RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 PHACTR4Q8IZ21 702 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 LINC01555Q8NAE3 123 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 OR8J3Q8NGG0 315 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 WDR48Q8TAF3 677 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 FAM3CQ92520 227 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 TESCQ96BS2 214 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 REPS1Q96D71 796 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 AURKBQ96GD4 344 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-202ENST00000345734 THUMPD3Q9BV44 507 aaKnown RBP8.85□□□□□ -0.99
ATG4A-202ENST00000345734 TRIM15Q9C019 465 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 OR51B5Q9H339 312 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 EHD1Q9H4M9 534 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 XKR8Q9H6D3 395 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 CAAP1Q9H8G2 361 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 PRDM8Q9NQV8 689 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 IMP3Q9NV31 184 aaKnown RBP8.85□□□□□ -0.99
ATG4A-202ENST00000345734 NDRG2Q9UN36 371 aaKnown RBP8.85□□□□□ -0.99
ATG4A-202ENST00000345734 AURKCQ9UQB9 309 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 LRCH1Q9Y2L9 728 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 DTNAQ9Y4J8 743 aa8.85□□□□□ -0.99
ATG4A-202ENST00000345734 TRBV5-3A0A0A0MS03 114 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 A0A1B0GVG6 124 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 A0A1W2PPV9 198 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 TCRBV5S2A0A599 114 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 DHRS12A0PJE2 317 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 PRR19A6NJB7 356 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 YY2O15391 372 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 MYO1DO94832 1006 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 DLGAP3O95886 979 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 C1QCP02747 245 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 GBAP04062 536 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 EFNA1P20827 205 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 PRPS1L1P21108 318 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 PTPN6P29350 595 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 WNT3P56703 355 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 CYP4F3Q08477 520 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 SMAD4Q13485 552 aaKnown RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 FXNQ16595 210 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 HIST2H2ACQ16777 129 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 HKDC1Q2TB90 917 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 RUNDC3AQ59EK9 446 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 EOGTQ5NDL2 527 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 HIST2H2AA3Q6FI13 130 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 Q6ZS52 159 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 AMIGO2Q86SJ2 522 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 FAM129CQ86XR2 697 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 WFDC8Q8IUA0 241 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 TICAM1Q8IUC6 712 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 TBC1D21Q8IYX1 336 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 ADGRG5Q8IZF4 528 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 FAM9CQ8IZT9 166 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 C10orf111Q8N326 155 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 DTWD1Q8N5C7 304 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 OR10A6Q8NH74 314 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 HMGB4Q8WW32 186 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 NCSTNQ92542 709 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 SH3KBP1Q96B97 665 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 ZNF583Q96ND8 569 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 HAUS8Q9BT25 410 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 REXO4Q9GZR2 422 aaKnown RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 KCNH6Q9H252 994 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 RPF2Q9H7B2 306 aaKnown RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 CARS2Q9HA77 564 aaKnown RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 CCM2LQ9NUG4 571 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 MMP17Q9ULZ9 603 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 MAN2B2Q9Y2E5 1009 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 BTBD3Q9Y2F9 522 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 V9GYQ6 96 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 MDC1Q14676 2089 aaKnown RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 A0A096LPI6 279 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 PRSS38A1L453 326 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 PDZK1P1A8MUH7 402 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 FOXE1O00358 373 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 PEX1O43933 1283 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 PCDH7O60245 1069 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 HTR3BO95264 441 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 ANXA4P09525 319 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 LAMP1P11279 417 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 COX7A2P14406 83 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 HOXB9P17482 250 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 TIA1P31483 386 aaKnown RBP eCLIP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 KIR3DL1P43629 444 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 MTAPQ13126 283 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 ARHGAP19Q14CB8 494 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 CYP51A1Q16850 503 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 SPIN4Q56A73 249 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 MTX3Q5HYI7 312 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 LRIF1Q5T3J3 769 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 THOC7Q6I9Y2 204 aaKnown RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 GLYATQ6IB77 296 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 ANO7Q6IWH7 933 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 ENPP7Q6UWV6 458 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 RD3Q7Z3Z2 195 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 GPR180Q86V85 440 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 C17orf64Q86WR6 236 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 DMRTC2Q8IXT2 367 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 OR1E3Q8WZA6 343 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 PDXPQ96GD0 296 aa8.84□□□□□ -0.99
ATG4A-202ENST00000345734 SCARF2Q96GP6 870 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-202ENST00000345734 ITCHQ96J02 903 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms