RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 OR1F2PQ96R84 312 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 TAAR6Q96RI8 345 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 LPAR4Q99677 370 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 ERP44Q9BS26 406 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 SPNS1Q9H2V7 528 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 PELI2Q9HAT8 420 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 OARD1Q9Y530 152 aa11.68□□□□□ -0.54
SGCA-202ENST00000344627 ITPR2Q14571 2701 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 CELSR2Q9HCU4 2923 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 ARHGAP10A1A4S6 786 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 CXorf49A8MYA2 514 aaPredicted RBP11.67□□□□□ -0.54
SGCA-202ENST00000344627 CCL21O00585 134 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 TP73O15350 636 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 RAD51CO43502 376 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 DNAJB6O75190 326 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 UNC5CO95185 931 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 CD46P15529 392 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 JAK1P23458 1154 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 GDF5P43026 501 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 KCNK10P57789 538 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 TAS2R50P59544 299 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 REEP5Q00765 189 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 POU4F1Q01851 419 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 RHAGQ02094 409 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 OC90Q02509 493 aaPredicted RBP11.67□□□□□ -0.54
SGCA-202ENST00000344627 SRSF11Q05519 484 aaKnown RBP11.67□□□□□ -0.54
SGCA-202ENST00000344627 PPP1R3AQ16821 1122 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 C18orf21Q32NC0 220 aaPredicted RBP11.67□□□□□ -0.54
SGCA-202ENST00000344627 ZNF766Q5HY98 468 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 C3orf62Q6ZUJ4 267 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 MRGPRGQ86SM5 289 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 GPSM1Q86YR5 675 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 CTAGE3PQ8IX95 158 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 BEST3Q8N1M1 668 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 SPATA6LQ8N4H0 392 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 AFAP1L2Q8N4X5 818 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 SLC5A8Q8N695 610 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 SNX31Q8N9S9 440 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 PLPP5Q8NEB5 264 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 SPATA4Q8NEY3 305 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 UTP15Q8TED0 518 aaKnown RBP11.67□□□□□ -0.54
SGCA-202ENST00000344627 ITLN2Q8WWU7 325 aaPredicted RBP11.67□□□□□ -0.54
SGCA-202ENST00000344627 ANKRD7Q92527 254 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 TSPAN17Q96FV3 270 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 PDLIM2Q96JY6 352 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 PTCHD1Q96NR3 888 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 SARGQ9BW04 601 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 KLHL31Q9H511 634 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 CAB39LQ9H9S4 337 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 MMP25Q9NPA2 562 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 KLHL1Q9NR64 748 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 SMYD2Q9NRG4 433 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 ANKRD10Q9NXR5 420 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 WWOXQ9NZC7 414 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 WHRNQ9P202 907 aa11.67□□□□□ -0.54
SGCA-202ENST00000344627 MTO1Q9Y2Z2 717 aaKnown RBP11.67□□□□□ -0.54
SGCA-202ENST00000344627 UTP11Q9Y3A2 253 aaKnown RBP11.67□□□□□ -0.54
SGCA-202ENST00000344627 CENPEQ02224 2701 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 CRYBG3Q68DQ2 2970 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 SYNDIG1LA6NDD5 238 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 A8MUA0 341 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 MAGEB17A8MXT2 336 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 CLGNO14967 610 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 PHGDHO43175 533 aaKnown RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 PRMT3O60678 531 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 S100BP04271 92 aaPredicted RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 CCDC166P0CW27 439 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 C1GALT1C1LP0DN25 315 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 ESRRAP11474 423 aaPredicted RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 RNH1P13489 461 aaKnown RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 COX6B1P14854 86 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 GNAZP19086 355 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 CAPN3P20807 821 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 PLTPP55058 493 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 STXBP1P61764 594 aaKnown RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 BTN3A2P78410 334 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 CDKL1Q00532 357 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 ILF2Q12905 390 aaKnown RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 ACER2Q5QJU3 275 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 Q6ZPB1 254 aaPredicted RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 SRRM1Q8IYB3 904 aaKnown RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 C17orf53Q8N3J3 647 aaPredicted RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 ANKRD53Q8N9V6 530 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 ARMC2Q8NEN0 867 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 EXT2Q93063 718 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 CCDC120Q96HB5 630 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 FAR2Q96K12 515 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 CPNE1Q99829 537 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 UTP23Q9BRU9 249 aaKnown RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 DERL2Q9GZP9 239 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 CNOT10Q9H9A5 744 aaKnown RBP11.66□□□□□ -0.54
SGCA-202ENST00000344627 POPDC3Q9HBV1 291 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 LANCL2Q9NS86 450 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 CD274Q9NZQ7 290 aa11.66□□□□□ -0.54
SGCA-202ENST00000344627 A0A0G2JN53 185 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 CTAGE15A4D2H0 777 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 ASPDHA6ND91 283 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 ANKDD1BA6NHY2 528 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 FAM227AF5H4B4 570 aa11.65□□□□□ -0.54
SGCA-202ENST00000344627 FANCGO15287 622 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms