RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 WBP11Q9Y2W2 641 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 GNB5O14775 395 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 NPPAP01160 153 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 PGRP06401 933 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 CD9P21926 228 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 CD27P26842 260 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 SGSHP51688 502 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 TRAP1Q12931 704 aaKnown RBP15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 TMEM44Q2T9K0 475 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 PDZK1Q5T2W1 519 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 SLC30A6Q6NXT4 461 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 CEACAM20Q6UY09 585 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 BNIPLQ7Z465 357 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 ARL14Q8N4G2 192 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 GPR26Q8NDV2 337 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 TIMM29Q9BSF4 260 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 G6PC3Q9BUM1 346 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 MTCH2Q9Y6C9 303 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 MYOCOSA0A1B0GUC4 107 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 E7EQ34 232 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 FAM189A1O60320 539 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 CD63P08962 238 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 RAP2AP10114 183 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 GP1BBP13224 206 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 ACADLP28330 430 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 RGRP47804 291 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 XKP51811 444 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 CHN2P52757 468 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 COX10Q12887 443 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 CDKL4Q5MAI5 379 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 TRIQKQ629K1 86 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 EPGNQ6UW88 154 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 PDZD3Q86UT5 571 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 SYNPOQ8N3V7 929 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 FITM2Q8N6M3 262 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 IPCEF1Q8WWN9 437 aaPredicted RBP15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 DOCK1Q14185 1865 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 VSTM5A8MXK1 200 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 TRIM3O75382 744 aaPredicted RBP15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 DRD2P14416 443 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 SLAMF1Q13291 335 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 DGCR6Q14129 220 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 MRPL58Q14197 206 aaKnown RBP15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 CATSPEREQ5SY80 951 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 GEMIN6Q8WXD5 167 aaKnown RBP15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 OR5P2Q8WZ92 322 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 MIEF2Q96C03 454 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 FBXL8Q96CD0 374 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 EDEM2Q9BV94 578 aa15.77■□□□□ 0.12
SMARCA4-201ENST00000344626 HOXC11O43248 304 aaPredicted RBP15.77■□□□□ 0.11
SMARCA4-201ENST00000344626 RFPL1O75677 317 aa15.77■□□□□ 0.11
SMARCA4-201ENST00000344626 ATP4BP51164 291 aa15.77■□□□□ 0.11
SMARCA4-201ENST00000344626 CDK6Q00534 326 aa15.77■□□□□ 0.11
SMARCA4-201ENST00000344626 OR52E8Q6IFG1 317 aa15.77■□□□□ 0.11
SMARCA4-201ENST00000344626 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.77■□□□□ 0.11
SMARCA4-201ENST00000344626 OR8H2Q8N162 312 aa15.77■□□□□ 0.11
SMARCA4-201ENST00000344626 LINC00471Q8N535 108 aa15.77■□□□□ 0.11
SMARCA4-201ENST00000344626 CKLFQ9UBR5 152 aa15.77■□□□□ 0.11
SMARCA4-201ENST00000344626 TMEM233B4DJY2 109 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 hCG_2039718K7EN88 272 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 BCHEP06276 602 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 TIA1P31483 386 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 KIR2DS3Q14952 304 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 OR2AJ1Q8NGZ0 328 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 PHOSPHO1Q8TCT1 267 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 FARSBQ9NSD9 589 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 STMN3Q9NZ72 180 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 ATXN10Q9UBB4 475 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 B4GALT7Q9UBV7 327 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 AHCTF1Q8WYP5 2266 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 PRSS56P0CW18 603 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 UQCRC2P22695 453 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 PTDSS1P48651 473 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 NOXRED1Q6NXP6 359 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 PLD6Q8N2A8 252 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 PNPLA2Q96AD5 504 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 LPAR4Q99677 370 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 ZFYVE21Q9BQ24 234 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 C6orf106Q9H6K1 298 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 LHX3Q9UBR4 397 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 HHLA1C9JL84 531 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 SLC35E2BP0CK96 405 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 YAP1P46937 504 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 POU6F2P78424 691 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 DOC2AQ14183 400 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 TMEM198Q66K66 360 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 CLVS1Q8IUQ0 354 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 CNDP2Q96KP4 475 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 SMIM14Q96QK8 99 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 BCAS2O75934 225 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 TUBB3Q13509 450 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 NSDHLQ15738 373 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 ARFGAP1Q8N6T3 406 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 KDM1BQ8NB78 822 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 DDHD1Q8NEL9 900 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 SLC25A36Q96CQ1 311 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 CRB3Q9BUF7 120 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 IFT27Q9BW83 186 aa15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 C6orf62Q9GZU0 229 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-201ENST00000344626 C14orf105Q9NVL8 296 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms