RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TEX47Q8TBZ9 253 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 FAM167AQ96KS9 214 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 MRGPRX2Q96LB1 330 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 LINC00052Q96N35 136 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 NECTIN4Q96NY8 510 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 GFM1Q96RP9 751 aaKnown RBP7.84□□□□□ -1.16
ATG4A-201ENST00000343524 GMLQ99445 158 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 CPPED1Q9BRF8 314 aaPredicted RBP7.84□□□□□ -1.16
ATG4A-201ENST00000343524 TMEM43Q9BTV4 400 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 NFKBIZQ9BYH8 718 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 DERL2Q9GZP9 239 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 GAREM1Q9H706 876 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 GALNT9Q9HCQ5 603 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 BIN3Q9NQY0 253 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 PRMT7Q9NVM4 692 aaPredicted RBP7.84□□□□□ -1.16
ATG4A-201ENST00000343524 CLN6Q9NWW5 311 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 ASIC5Q9NY37 505 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 MARK1Q9P0L2 795 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 CPNE7Q9UBL6 633 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 SCP2D1Q9UJQ7 156 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF222Q9UK12 451 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 SCML1Q9UN30 329 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 NDRG2Q9UN36 371 aaKnown RBP7.84□□□□□ -1.16
ATG4A-201ENST00000343524 FZD1Q9UP38 647 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 KCNMB2Q9Y691 235 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 CDH10Q9Y6N8 788 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF236Q9UL36 1845 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 ZSWIM8A7E2V4 1837 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 A0A0A6YYJ9 748 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 A8MXK9 166 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 H7C2Y5 167 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 SIGLEC6O43699 453 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 SSX5O60225 188 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 SLC19A2O60779 497 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 PMPCBO75439 489 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 JCHAINP01591 159 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 ESR1P03372 595 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 SEMG1P04279 462 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 CYP17A1P05093 508 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 CLEC2LP0C7M8 214 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 CXCL8P10145 99 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 G6PDP11413 515 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 LCP1P13796 627 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 MTHFD2P13995 350 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 DARSP14868 501 aaKnown RBP7.83□□□□□ -1.16
ATG4A-201ENST00000343524 GJA5P36382 358 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 CAP2P40123 477 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 MEOX2P50222 304 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 RAB13P51153 203 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 AKR1D1P51857 326 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 DCDC1P59894 354 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 CSTF1Q05048 431 aaKnown RBP7.83□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF91Q05481 1191 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 MLLT11Q13015 90 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-201ENST00000343524 TMEM132DQ14C87 1099 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 KIAA0040Q15053 153 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 SSX1Q16384 188 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 GPR33Q49SQ1 333 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 LRIF1Q5T3J3 769 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 LCE2AQ5TA79 106 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-201ENST00000343524 FAM160B1Q5W0V3 765 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 BHLHB9Q6PI77 547 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 LRFN4Q6PJG9 635 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 GCNT7Q6ZNI0 430 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 FAM92BQ6ZTR7 304 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 MSANTD1Q6ZTZ1 278 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 USP45Q70EL2 814 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 GPR155Q7Z3F1 870 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 SERPINA11Q86U17 422 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 ADGRF3Q8IZF5 1079 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 DEFB106AQ8N104 65 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 LILRB2Q8N423 598 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 CAMKVQ8NCB2 501 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 ATP6V1C2Q8NEY4 427 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 OR52K2Q8NGK3 314 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.83□□□□□ -1.16
ATG4A-201ENST00000343524 NETO1Q8TDF5 533 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 MYLIPQ8WY64 445 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 FOXJ1Q92949 421 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 WNT8BQ93098 351 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 NT5C3BQ969T7 300 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 ASIC4Q96FT7 647 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 NSUN5Q96P11 429 aaKnown RBP7.83□□□□□ -1.16
ATG4A-201ENST00000343524 RBP7Q96R05 134 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 KCNJ15Q99712 375 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 NPAS1Q99742 590 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 DPY30Q9C005 99 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 PITHD1Q9GZP4 211 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-201ENST00000343524 KCNH6Q9H252 994 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 MIXL1Q9H2W2 232 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 SLC28A3Q9HAS3 691 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 GLOD4Q9HC38 313 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 PRDM9Q9NQV7 894 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 UBP1Q9NZI7 540 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 COPZ2Q9P299 210 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 PCTPQ9UKL6 214 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 TNFSF13BQ9Y275 285 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 POLR3HQ9Y535 204 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-201ENST00000343524 CLCA3PQ9Y6N3 262 aa7.83□□□□□ -1.16
ATG4A-201ENST00000343524 MIA3Q5JRA6 1907 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms