RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 EMX2Q04743 252 aa13.04□□□□□ -0.32
TMEM248-201ENST00000341567 RGS1Q08116 209 aa13.04□□□□□ -0.32
TMEM248-201ENST00000341567 TUBB3Q13509 450 aa13.04□□□□□ -0.32
TMEM248-201ENST00000341567 RAPSNQ13702 412 aa13.04□□□□□ -0.32
TMEM248-201ENST00000341567 MACC1Q6ZN28 852 aa13.04□□□□□ -0.32
TMEM248-201ENST00000341567 ERVK13-1Q9NX77 482 aa13.04□□□□□ -0.32
TMEM248-201ENST00000341567 A0A1W2PQ72 361 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 DRGXA6NNA5 263 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 SERPINB7O75635 380 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 CD1EP15812 388 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 ITIH1P19827 911 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 IFI44LQ53G44 452 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 LAPTM4BQ86VI4 370 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 RHEBL1Q8TAI7 183 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 C17orf62Q9BQA9 187 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 SLC35A5Q9BS91 424 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 SRMSQ9H3Y6 488 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 SPIN1Q9Y657 262 aaPredicted RBP13.03□□□□□ -0.32
TMEM248-201ENST00000341567 STX16O14662 325 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 HOXB2P14652 356 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 MATN1P21941 496 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 HTR1EP28566 365 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 AP1S2P56377 157 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 C1orf61Q13536 156 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 HSF5Q4G112 596 aaPredicted RBP13.03□□□□□ -0.32
TMEM248-201ENST00000341567 ZNF517Q6ZMY9 492 aaPredicted RBP13.03□□□□□ -0.32
TMEM248-201ENST00000341567 ZNF382Q96SR6 550 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 NEK6Q9HC98 313 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 ARMC1Q9NVT9 282 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 MCUBQ9NWR8 336 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 DOCK5Q9H7D0 1870 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 LOC285095A0A1B0GVY8 99 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 TCRBV3S1A0A5B6 114 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 ACOT8O14734 319 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 OXSR1O95747 527 aaPredicted RBP13.03□□□□□ -0.32
TMEM248-201ENST00000341567 C6orf47O95873 294 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 CCNYL3P0C7X3 344 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 FPR1P21462 350 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 GPX3P22352 226 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 PPIBP23284 216 aaKnown RBP13.03□□□□□ -0.32
TMEM248-201ENST00000341567 CST5P28325 142 aaPredicted RBP13.03□□□□□ -0.32
TMEM248-201ENST00000341567 TAS2R41P59536 307 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 SRSF11Q05519 484 aaKnown RBP13.03□□□□□ -0.32
TMEM248-201ENST00000341567 DOC2AQ14183 400 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 TMEM31Q5JXX7 168 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 NOXRED1Q6NXP6 359 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 LRRTM4Q86VH4 590 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 FAM46DQ8NEK8 389 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 NDNFQ8TB73 568 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 TMCO6Q96DC7 493 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
TMEM248-201ENST00000341567 OAS3Q9Y6K5 1087 aaKnown RBP13.03□□□□□ -0.32
TMEM248-201ENST00000341567 FEZF1A0PJY2 475 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 HTR3EA5X5Y0 456 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 TMEM189-UBE2V1I3L0A0 370 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 EBLN1P0CF75 366 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 CKMT1AP12532 417 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 ARNTP27540 789 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 MTAPQ13126 283 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 HLA-DQA1Q5Y7H0 255 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 RNF111Q6ZNA4 994 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 BEND5Q7L4P6 421 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 CLECL1Q8IZS7 167 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 FIBINQ8TAL6 211 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 C17orf50Q8WW18 174 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 OVCA2Q8WZ82 227 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 TMEM125Q96AQ2 219 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 SLC38A2Q96QD8 506 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 PHOX2BQ99453 314 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 MOV10Q9HCE1 1003 aaKnown RBP13.02□□□□□ -0.32
TMEM248-201ENST00000341567 SDR39U1Q9NRG7 319 aaPredicted RBP13.02□□□□□ -0.32
TMEM248-201ENST00000341567 CORO2BQ9UQ03 480 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 CFL2Q9Y281 166 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 HCFC2Q9Y5Z7 792 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 TRIM64CA6NLI5 447 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 AP3D1O14617 1153 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 NDUFS4O43181 175 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 UGT2B17O75795 530 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 CCNB2O95067 398 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 TIMP1P01033 207 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 HOXD12P35452 270 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 RPP38P78345 283 aaKnown RBP13.02□□□□□ -0.32
TMEM248-201ENST00000341567 CLCA4Q14CN2 919 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 HEPACAMQ14CZ8 416 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 AMZ1Q400G9 498 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 IQCCQ4KMZ1 466 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 DCST1Q5T197 706 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 KIAA1614Q5VZ46 1190 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 DUS1LQ6P1R4 473 aaKnown RBP13.02□□□□□ -0.32
TMEM248-201ENST00000341567 SMARCD3Q6STE5 483 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 ASB18Q6ZVZ8 466 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 LARP4Q71RC2 724 aaKnown RBP eCLIP13.02□□□□□ -0.325e-6■■□□□ 12.4
TMEM248-201ENST00000341567 HSD11B1LQ7Z5J1 315 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 CARM1Q86X55 608 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 MFSD6LQ8IWD5 586 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 FAM217AQ8IXS0 508 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 MACROD1Q9BQ69 325 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 TTYH2Q9BSA4 534 aa13.02□□□□□ -0.32
TMEM248-201ENST00000341567 RBCK1Q9BYM8 510 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms