RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CLP1Q92989 425 aaKnown RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 YIPF6Q96EC8 236 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 VMP1Q96GC9 406 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 CEP295NLQ96MC4 621 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 TBX5Q99593 518 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 EQTNQ9NQ60 294 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 METTL15A6NJ78 407 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 SEPT4O43236 478 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 PQBP1O60828 265 aaKnown RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 WISP3O95389 354 aaPredicted RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 CLEC2LP0C7M8 214 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 HLA-EP13747 358 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 MYL12AP19105 171 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 MANFP55145 182 aaKnown RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 OLR1P78380 273 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 CDK6Q00534 326 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 DBPQ10586 325 aaPredicted RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 PTGES3Q15185 160 aaKnown RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 SMU1Q2TAY7 513 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF551Q7Z340 670 aaPredicted RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 SORCS1Q8WY21 1168 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 DOHHQ9BU89 302 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 RIMKLBQ9ULI2 386 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 CFL2Q9Y281 166 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 GPR52Q9Y2T5 361 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 KCNE2Q9Y6J6 123 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 ASCC3Q8N3C0 2202 aaKnown RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 A0A1W2PQ09 198 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 OR6C75A6NL08 312 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF623O75123 536 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 ATF6P18850 670 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 GABRR2P28476 465 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 RAB8AP61006 207 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 SNAPC1Q16533 368 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 GALNT7Q86SF2 657 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 CCDC71Q8IV32 467 aaPredicted RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 PJA1Q8NG27 643 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 CMTM7Q96FZ5 175 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 CDADC1Q9BWV3 514 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 SEMA3GQ9NS98 782 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 TRPS1Q9UHF7 1281 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 MBD1Q9UIS9 605 aaPredicted RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 DYRK1BQ9Y463 629 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF840PA6NDX5 716 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 HAT1O14929 419 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 CATP04040 527 aaKnown RBP13.6□□□□□ -0.23
PCDH8-201ENST00000338862 UGT2B15P54855 530 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 SCN1BQ07699 218 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 SLAMF1Q13291 335 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 LDLRAD1Q5T700 205 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 CXorf57Q6NSI4 855 aaKnown RBP13.6□□□□□ -0.23
PCDH8-201ENST00000338862 OTOP2Q7RTS6 562 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 GLCCI1Q86VQ1 547 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 CCDC115Q96NT0 180 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 POLR2J3Q9H1A7 115 aaKnown RBP13.6□□□□□ -0.23
PCDH8-201ENST00000338862 STARD7Q9NQZ5 370 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 NKIRAS2Q9NYR9 191 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 FNIP2Q9P278 1114 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 RUVBL1Q9Y265 456 aaKnown RBP13.6□□□□□ -0.23
PCDH8-201ENST00000338862 HSPB11Q9Y547 144 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 GLOD5A6NK44 160 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 H7C4K7 107 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 M0R082 166 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 RFXAPO00287 272 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 SLITRK5O94991 958 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 OAZ2O95190 189 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 AMD1P17707 334 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 HOXA9P31269 272 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF45Q02386 682 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 GPR17Q13304 367 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 NDUFA5Q16718 116 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 ZSWIM7Q19AV6 140 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 TMIGD1Q6UXZ0 262 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 B3GLCTQ6Y288 498 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 CHPFQ8IZ52 775 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 MAGIXQ9H6Y5 334 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 SMURF1Q9HCE7 757 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF222Q9UK12 451 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 ANKRD34BA5PLL1 514 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 KMOO15229 486 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 SLC28A2O43868 658 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 ENTPD6O75354 484 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 ITGAMP11215 1152 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 RPS7P62081 194 aaKnown RBP13.6□□□□□ -0.23
PCDH8-201ENST00000338862 KEAP1Q14145 624 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 PPP2R2DQ66LE6 453 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 PNCKQ6P2M8 343 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 AGTRAPQ6RW13 159 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 RTN4RL1Q86UN2 441 aaPredicted RBP13.6□□□□□ -0.23
PCDH8-201ENST00000338862 DNAJC22Q8N4W6 341 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 FCGR1BQ92637 280 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 TMEM169Q96HH4 297 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 TMED9Q9BVK6 235 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 NLNQ9BYT8 704 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 RRAGCQ9HB90 399 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF624Q9P2J8 865 aaPredicted RBP13.6□□□□□ -0.23
PCDH8-201ENST00000338862 PCDHB11Q9Y5F2 797 aa13.6□□□□□ -0.23
PCDH8-201ENST00000338862 IGLV3-10A0A075B6K4 115 aa13.59□□□□□ -0.23
PCDH8-201ENST00000338862 NEDD8-MDP1E9PL57 170 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms