RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ZC3H14Q6PJT7 736 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SCUBE1Q8IWY4 988 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TMEM132CQ8N3T6 1108 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 AMER3Q8N944 861 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 OR2L5Q8NG80 312 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 NT5CQ8TCD5 201 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TCEAL3Q969E4 200 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RERGQ96A58 199 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CCDC74AQ96AQ1 378 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 QRFPRQ96P65 431 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TEFMQ96QE5 360 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CDRT15Q96T59 188 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RAB33BQ9H082 229 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MMADHCQ9H3L0 296 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SLAMF8Q9P0V8 285 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 EPHA6Q9UF33 1036 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 KLHL3Q9UH77 587 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PACSIN3Q9UKS6 424 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RAB23Q9ULC3 237 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 EXO1Q9UQ84 846 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RALGAPA1Q6GYQ0 2036 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CPED1A4D0V7 1026 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GABRR3A8MPY1 467 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CASC3O15234 703 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 HCRTR1O43613 425 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 B3GALT4O96024 378 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 EIF2S1P05198 315 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SLC35G6P0C7Q6 338 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ENGP17813 658 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MAPK12P53778 367 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 C21orf58P58505 322 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RAB8AP61006 207 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MC1RQ01726 317 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CAPRIN1Q14444 709 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 NR1D2Q14995 579 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MAPKAPK3Q16644 382 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 OR4F3Q6IEY1 312 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 FAM71E1Q6IPT2 247 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TRIM40Q6P9F5 258 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ABHD17CQ6PCB6 329 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ZNF793Q6ZN11 406 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 BNC2Q6ZN30 1099 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 USP53Q70EK8 1073 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ULK2Q8IYT8 1036 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CAMKVQ8NCB2 501 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 LRRC58Q96CX6 371 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ZDHHC12Q96GR4 267 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DDX31Q9H8H2 851 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MYNNQ9NPC7 610 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PRDM7Q9NQW5 492 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GID8Q9NWU2 228 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ADAM29Q9UKF5 820 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 BTBD3Q9Y2F9 522 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 LY6G6EA0A0G2JKS1 128 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TLCD2A6NGC4 264 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 KHNYNO15037 678 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DUX1O43812 170 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TMPRSS11DO60235 418 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PDE5AO76074 875 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 IL3P08700 152 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PIM1P11309 404 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 HPCAL1P37235 193 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 KIR3DL1P43629 444 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 VSX2P58304 361 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CFHR1Q03591 330 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SRSF11Q05519 484 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DPY19L1Q2PZI1 675 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DEFB110Q30KQ9 67 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 C8orf82Q6P1X6 216 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GUSBP11Q6P575 273 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GPR180Q86V85 440 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MINDY1Q8N5J2 469 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DPP10Q8N608 796 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 FAM181AQ8N9Y4 354 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SRFBP1Q8NEF9 429 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 OR8K5Q8NH50 307 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 STARD8Q92502 1023 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TM4SF18Q96CE8 201 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 KCNC2Q96PR1 638 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 EPB41L1Q9H4G0 881 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 REEP4Q9H6H4 257 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MAPRE3Q9UPY8 281 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PCDHGA5Q9Y5G8 931 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 U3KQA8 63 aa14.04□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MYO15AQ9UKN7 3530 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 A0A0A6YYD5 115 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 IGHV5-51A0A0C4DH38 117 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 A8MUI8 341 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PRR33A8MZF0 331 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 FXYD1O00168 92 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SORBS2O94875 1100 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ZNF888P0CJ79 500 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 LAMP1P11279 417 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CD1CP29017 333 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SNRPNP63162 240 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ELF3P78545 371 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GPLD1P80108 840 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TGM3Q08188 693 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TRMT5Q32P41 509 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CPTPQ5TA50 214 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms