RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SLC7A2P52569 658 aa14□□□□□ -0.17
CBX3-201ENST00000337620 EPHA4P54764 986 aa14□□□□□ -0.17
CBX3-201ENST00000337620 MTTPP55157 894 aa14□□□□□ -0.17
CBX3-201ENST00000337620 RAB8AP61006 207 aa14□□□□□ -0.17
CBX3-201ENST00000337620 DPY19L1Q2PZI1 675 aa14□□□□□ -0.17
CBX3-201ENST00000337620 AMZ1Q400G9 498 aa14□□□□□ -0.17
CBX3-201ENST00000337620 CPTPQ5TA50 214 aa14□□□□□ -0.17
CBX3-201ENST00000337620 ZCCHC8Q6NZY4 707 aaKnown RBP14□□□□□ -0.17
CBX3-201ENST00000337620 TRIM40Q6P9F5 258 aa14□□□□□ -0.17
CBX3-201ENST00000337620 SLC23A3Q6PIS1 610 aa14□□□□□ -0.17
CBX3-201ENST00000337620 KANSL1Q7Z3B3 1105 aa14□□□□□ -0.17
CBX3-201ENST00000337620 DGLUCYQ7Z3D6 616 aa14□□□□□ -0.17
CBX3-201ENST00000337620 OR4N4Q8N0Y3 316 aa14□□□□□ -0.17
CBX3-201ENST00000337620 MINDY1Q8N5J2 469 aa14□□□□□ -0.17
CBX3-201ENST00000337620 AMER3Q8N944 861 aa14□□□□□ -0.17
CBX3-201ENST00000337620 KCT2Q8NC54 265 aa14□□□□□ -0.17
CBX3-201ENST00000337620 OR2L5Q8NG80 312 aa14□□□□□ -0.17
CBX3-201ENST00000337620 PUM2Q8TB72 1066 aaKnown RBP eCLIP14□□□□□ -0.179e-18■■■■□ 21.8
CBX3-201ENST00000337620 GTF2H4Q92759 462 aa14□□□□□ -0.17
CBX3-201ENST00000337620 RERGQ96A58 199 aaPredicted RBP14□□□□□ -0.17
CBX3-201ENST00000337620 KCNC2Q96PR1 638 aa14□□□□□ -0.17
CBX3-201ENST00000337620 TRAPPC9Q96Q05 1148 aa14□□□□□ -0.17
CBX3-201ENST00000337620 TEFMQ96QE5 360 aaKnown RBP14□□□□□ -0.17
CBX3-201ENST00000337620 GPATCH1Q9BRR8 931 aaKnown RBP14□□□□□ -0.17
CBX3-201ENST00000337620 GTPBP2Q9BX10 602 aaKnown RBP14□□□□□ -0.17
CBX3-201ENST00000337620 SLC6A16Q9GZN6 736 aa14□□□□□ -0.17
CBX3-201ENST00000337620 DENND2DQ9H6A0 471 aaPredicted RBP14□□□□□ -0.17
CBX3-201ENST00000337620 REEP4Q9H6H4 257 aa14□□□□□ -0.17
CBX3-201ENST00000337620 MYNNQ9NPC7 610 aa14□□□□□ -0.17
CBX3-201ENST00000337620 MAPRE3Q9UPY8 281 aa14□□□□□ -0.17
CBX3-201ENST00000337620 C4orf51C9J302 202 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 H0YGG7 62 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 ARHGAP33O14559 1287 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 SH3BP5O60239 455 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 KCNH1O95259 989 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 B3GALT4O96024 378 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 LAMP1P11279 417 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 PIM1P11309 404 aaPredicted RBP13.99□□□□□ -0.17
CBX3-201ENST00000337620 TCN1P20061 433 aaPredicted RBP13.99□□□□□ -0.17
CBX3-201ENST00000337620 MSX2P35548 267 aaPredicted RBP13.99□□□□□ -0.17
CBX3-201ENST00000337620 GFERP55789 205 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 C21orf58P58505 322 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 ARF3P61204 181 aaPredicted RBP13.99□□□□□ -0.17
CBX3-201ENST00000337620 PWP1Q13610 501 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 CEACAM7Q14002 265 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 FAM71E1Q6IPT2 247 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 PRMT9Q6P2P2 845 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 CYB5D1Q6P9G0 228 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 ABHD17CQ6PCB6 329 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 DLEU7Q6UYE1 221 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 C19orf47Q8N9M1 422 aaKnown RBP13.99□□□□□ -0.17
CBX3-201ENST00000337620 SRFBP1Q8NEF9 429 aaKnown RBP13.99□□□□□ -0.17
CBX3-201ENST00000337620 WDR60Q8WVS4 1066 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 THAP11Q96EK4 314 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 TRIM8Q9BZR9 551 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 SMOC1Q9H4F8 434 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 RMND5AQ9H871 391 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 DDX31Q9H8H2 851 aaKnown RBP13.99□□□□□ -0.17
CBX3-201ENST00000337620 FAM60AQ9NP50 221 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 C1GALT1Q9NS00 363 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 KLHL3Q9UH77 587 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 EXO1Q9UQ84 846 aaKnown RBP13.99□□□□□ -0.17
CBX3-201ENST00000337620 BTBD3Q9Y2F9 522 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 YKT6O15498 198 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 P2RX6O15547 441 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 NPPAP01160 153 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 CCT8P50990 548 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 RELAQ04206 551 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 KPNB1Q14974 876 aaKnown RBP13.99□□□□□ -0.17
CBX3-201ENST00000337620 PIGGQ5H8A4 983 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 C6orf163Q5TEZ5 329 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 C1orf146Q5VVC0 180 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 FBXW10Q5XX13 1052 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 DNAJC14Q6Y2X3 702 aaPredicted RBP13.99□□□□□ -0.17
CBX3-201ENST00000337620 ZNF793Q6ZN11 406 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 RNF44Q7L0R7 432 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 CAMKVQ8NCB2 501 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 OR8K5Q8NH50 307 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 OR4C6Q8NH72 309 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 NT5CQ8TCD5 201 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 TM4SF18Q96CE8 201 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 TM4SF19Q96DZ7 209 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 ZDHHC12Q96GR4 267 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 ITCHQ96J02 903 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 CCDC3Q9BQI4 270 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 DUSP26Q9BV47 211 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 ARRDC1-AS1Q9H2J1 176 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 PRDM7Q9NQW5 492 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 TMEM181Q9P2C4 612 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 ADAM29Q9UKF5 820 aa13.99□□□□□ -0.17
CBX3-201ENST00000337620 ARID1BQ8NFD5 2236 aaPredicted RBP13.98□□□□□ -0.17
CBX3-201ENST00000337620 IGHV1OR21-1A0A087WYE8 117 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 SIGLEC6O43699 453 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 TMPRSS11DO60235 418 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 CER1O95813 267 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 SYPP08247 313 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 FURINP09958 794 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 ZNF888P0CJ79 500 aaPredicted RBP13.98□□□□□ -0.17
CBX3-201ENST00000337620 SLC6A2P23975 617 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 GPR3P46089 330 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms